Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00123 ATGACAGTAGATCTGGTAGGGTTTTCCAAGATCAGGATGGAAGAAGAGATAGCCATACAAGAAGCTGCTTCCGCTGGGTTGAAGAGCATGGAGCATTTAATTCGCGTTCTTTCTTCTCAAGCCCCTTCCAATCACCTTGACTGCTCAGAAATCACAGACTTCACCGTCTCTAAGTTCAAGCAGGTTATTAATTTGTTGAATCGCACCGGCCACGCTCGATTTCGTCGCGCACCTTCTCATCCTTCTCCCTCTGTTTCTGTTCCTTGTAAATCTGAAAAATTCAACCCTGTTATTCAAAACCAACCCCAGTCAGTGACTCTTGACTTTGCCAAGCCCGTATTGGTCAAATCCAATCCCAACCCATCTACCGATTTAGCAGTTTCTCAACACTCCAAGTCCAAGGACACCTATAGCATATCCCCTCCCATCTCCACCACCACCTCCTCCTTCATGTCCTCCATCACCGGTGACGGCAGCGTTTCCGACGGCAAGATAGGCCCCTCCATCCTCGCCGCCGCACCTGCCGTTTCCGTCGGCAAGCCTCCCCTGTCCTCATCTCACCGGAAAAGGTGTCACGATGCTACCTTCTCCGCCGGCGCATCCGGAAAAGTCTCATCCTCGGGCCAGTGCCACTGCTCCAAGAGAAGGAAATCCCGTGTGAAACGAACGATCCGAGTGCCGGCGATAAGCTCGAAGATTGCCGATATACCAGCAGACGAGTACTCATGGAGAAAGTACGGTCAAAAACCCATCAAGGGATCACCTTACCCACGTGGGTATTACAAGTGCAGCAGCGTGAGAGGATGTCCAGCGAGGAAGCACGTGGAGCGAGCCCAAGATGATCCTAATATGCTCATCGTCACTTACGAGGGAGAGCACCGTCACTCGCAGGCCCAAACCACGGGAGCCGCCGCCGGTTTTAACTCTCACCCGATTTAA 939 0.5218 MTVDLVGFSKIRMEEEIAIQEAASAGLKSMEHLIRVLSSQAPSNHLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPSHPSPSVSVPCKSEKFNPVIQNQPQSVTLDFAKPVLVKSNPNPSTDLAVSQHSKSKDTYSISPPISTTTSSFMSSITGDGSVSDGKIGPSILAAAPAVSVGKPPLSSSHRKRCHDATFSAGASGKVSSSGQCHCSKRRKSRVKRTIRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHSQAQTTGAAAGFNSHPI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00123 312 Pfam WRKY DNA -binding domain 239 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00123 312 MobiDBLite consensus disorder prediction 120 140 - -
Gabi2179g00123 312 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00123 312 Gene3D WRKY domain 210 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00123 312 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 300 IPR044810 GO:0003700
Gabi2179g00123 312 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00123 312 SUPERFAMILY WRKY DNA-binding domain 235 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00123 312 Pfam Plant zinc cluster domain 188 235 IPR018872 -
Gabi2179g00123 312 FunFam WRKY transcription factor 65 221 298 - -
Gabi2179g00123 312 MobiDBLite consensus disorder prediction 293 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00123 Gabi-Chr2179 1394673 1396430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00123 1 298 WRKY Transcription Factor Family AT2G24570 56.832 1.54e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2179g00123 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00123 - - gmx:732587 438.343