Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00077 ATGCAAGTAATCTTCAAAGGCTGTTACTCCGTGAGGCCAATGGAACCAACATGGTGTGGTCGCATACCTTTATCAGAGTGGGATCAAATAGGAATCATAACTCACGTGCCAACAATATACTTCTACCGTCCCTCACAAAACTGGCTTTCGCAAGAGTCTACAATAGTTACCACCTTGAAAGACTCGCTAAGCCGAGTCCTAGTGCCGTTTTATCCATTAGCTGGTCGTTTACAATGGATAGGAAATGGTCGTTTAGAGCTTGAGTGCAATGAGTTAGGTGTTCGGTTCATCGAAGCTGAGTCCTTATCAAGTTTAGATGATCTTGGTGACTTTTCACCCTCTTCGGAGTACCGTTACCTTGTCCCAAGTGTAGACTATAGCGTCCCAATTCATGAGGTGCCTCTAGTTCTGATTCAGCTGACGAGGTTCAAGTGTGGTGGCATTAGCATTGGAACAACAATTTCACACGCTGTTGCGGATGGACCAAGTGCCATGCACTTCATTACTGAGTGGGCAAGGCTTGCACGAGGTGAAGCTTTGCAAACGGTGCCGTTTCTTGATCGAAAAGTGTTGCGTGCAGGCGAACCTCCTTTGGTGCCACCATGTCATGATCATGATCATGATCATGATCATTCGGAGTTCAATCTCCCTCCTCTGTTGCTCGGTCAATCTGAGAATACAGAGGAAAGGAAGGAAAAAACCACTGTTGCTATCATCAAACTGAGCAAAACTCAAGTTGAGATATTGAAAAAAACAGCAAATGAGAGTTGGCATAGACCTAGCAATGACCGTGGTTTTACCCGGTATGAGACGGTAACCGGTCACGTATGGAGAAGTGCATGCAAGGCTAGGGGGCATAAACAGGACCAACCAACGGCATTAGGTGTTTGTGTTGACTCAAGGTGTCGCATGCAACCTCCTTTGCCAAAAGGGTACTTTGGGAATGCTACTTTGGATGTGGTTGCTACTAGTCTTGCGGGTGATTTGGTTTCAAAGCCATTAGGGTATGCGTCGAGTAGAATAAGGGAAGCGATTGAGAAGGTTAATGATGAGTATGTGAGGTCAAGGATTGATTTCTTGAAGAACCAGGAGGATTTGACTAGGTTTCAAGATCTTCATGCAATATTAGGGAGTGACAAGGGGCCTTTCTATGGGAACCCAAATCTGGGTGTGATTAGTTGGTTGACTTTACCAATCTATGGGCTTGATTTTGGGTGGGGGAAGGAGGTTTATATGGGTCCAGGAACACATGAGTCTGATGGAGATTCTTTGCTTCTTCCTGGTCCTGATGGGGATGGATCTTTGCTTGTTGCTATTTGTCTCCAAGTGGTCCATATGGATGCGTTTACGAAGCATTTCTATGAAGACATTATGGGAGTATGA 1383 0.4526 MQVIFKGCYSVRPMEPTWCGRIPLSEWDQIGIITHVPTIYFYRPSQNWLSQESTIVTTLKDSLSRVLVPFYPLAGRLQWIGNGRLELECNELGVRFIEAESLSSLDDLGDFSPSSEYRYLVPSVDYSVPIHEVPLVLIQLTRFKCGGISIGTTISHAVADGPSAMHFITEWARLARGEALQTVPFLDRKVLRAGEPPLVPPCHDHDHDHDHSEFNLPPLLLGQSENTEERKEKTTVAIIKLSKTQVEILKKTANESWHRPSNDRGFTRYETVTGHVWRSACKARGHKQDQPTALGVCVDSRCRMQPPLPKGYFGNATLDVVATSLAGDLVSKPLGYASSRIREAIEKVNDEYVRSRIDFLKNQEDLTRFQDLHAILGSDKGPFYGNPNLGVISWLTLPIYGLDFGWGKEVYMGPGTHESDGDSLLLPGPDGDGSLLVAICLQVVHMDAFTKHFYEDIMGV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00077 460 Gene3D - 1 211 IPR023213 -
Gabi2179g00077 460 FunFam Tryptamine hydroxycinnamoyl transferase 222 454 - -
Gabi2179g00077 460 Gene3D - 223 456 IPR023213 -
Gabi2179g00077 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 451 - -
Gabi2179g00077 460 Pfam Transferase family 2 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00077 Gabi-Chr2179 756617 758011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00077 1 455 Monolignol Biosynthesis Gene Families AT5G48930 41.138 1.70e-118 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00077 K13065 - gmx:100777007 685.256