Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00072 ATGGAAGGTCCTCCTCGGTTTGTGGTGTTATCGTTGGTTATTATTATGTTGAGTATTACCACAAGTACATGCTCAGCTCAACTGACTCGTGGCTTCTACGGAAAAACATGCCCAAATGTTGAGCAGTTGGTACGCTCTGCCGTGGCGCAGAAGTTCCAGCAGACCTTTGTGACTGCTCCTGCCACTCTTCGACTCTTCTTCCATGATTGCTTTGTGCGGGGTTGTGATGCTTCGATTTTGCTTTCTTCTCCAAATAACAAGGCAGAGAAGGATAATCCTGATGACATTTCACTTGCTGGGGACGGCTTTGACACTGTTATTAAAGCCAAGGCAGCTGTTGATAGCGATCCTCAATGCCGAAACAAAGTCTCCTGTGCTGATATACTCGCTCTGGCTACTAGGGATGTTGTCAATTTGGCAGGGGGGCCATTTTATAATGTTGAATTAGGAAGGCGTGATGGGAGATTATCTACTATTGCTAGTGTTCAACATCATCTTCCTCACCCTGATTTCAACTTGAATCAACTCAATTCCATGTTTAGCTTTAATGGCCTCTCTCAGACAGATATGATTGCATTATCAGGTGCACATACAATTGGGTTCTCTCATTGCAACAGATTCTCAGGACGAATCTACAACTTTAGCCCCAGAAGAACAATTGACCCAACACTAAATTTGCAATATGCCTTCCAGCTTAGACAAATGTGCCCTTTAAGAGTTGATCCTAGAATTGCCATAAACATGGACCCTGTCACGCCTCAAACGTTTGACAATCAGTACTTCAAGAATTTGCAGCAAGGAAAGGGTCTATTCACTTCTGATGAGGTGCTGTTTACAGATGCAAGGTCAAAGGCCACAGTTAACTTATTTGCATCAAATGAAGGAGCTTTTGATAGTGCTTTTGTTCAGGCTATTACCAAGATGGGAAGGATTGGTGTTAAAACTGGACATCAAGGTGAAATTAGGATTGATTGCACTCGGCCCAACTAG 990 0.4333 MEGPPRFVVLSLVIIMLSITTSTCSAQLTRGFYGKTCPNVEQLVRSAVAQKFQQTFVTAPATLRLFFHDCFVRGCDASILLSSPNNKAEKDNPDDISLAGDGFDTVIKAKAAVDSDPQCRNKVSCADILALATRDVVNLAGGPFYNVELGRRDGRLSTIASVQHHLPHPDFNLNQLNSMFSFNGLSQTDMIALSGAHTIGFSHCNRFSGRIYNFSPRRTIDPTLNLQYAFQLRQMCPLRVDPRIAINMDPVTPQTFDNQYFKNLQQGKGLFTSDEVLFTDARSKATVNLFASNEGAFDSAFVQAITKMGRIGVKTGHQGEIRIDCTRPN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00072 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 Gene3D Peroxidase, domain 2 167 308 - -
Gabi2179g00072 329 Gene3D - 31 329 - -
Gabi2179g00072 329 PANTHER - 8 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 FunFam Peroxidase 31 176 - -
Gabi2179g00072 329 FunFam Peroxidase 167 308 - -
Gabi2179g00072 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gabi2179g00072 329 Pfam Peroxidase 44 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Gabi2179g00072 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Gabi2179g00072 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00072 329 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00072 Gabi-Chr2179 719770 722903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00072 1 329 Peroxidase AT2G18980 72.340 7.15e-177 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00072 K00430 - gmx:100804620 567.385