Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00071 ATGGAAGGTCCTCCTCGGTTTGTGGTGTTATCGTTGGTTATTATTATGTTGAGTATTACCACAAGTACATGCTCAGCTCAACTGACTCGTGGCTTCTACGGAAAAACATGCCCAAATGTTGAGCAGTTGGTACGCTCTGCCGTGGCGCAGAAGTTCCAGCAGACCTTTGTGACTGCTCCTGCCACTCTTCGACTCTTCTTCCATGATTGCTTTGTGCGGGGTTGTGATGCTTCGATTTTGCTTTCTTCTCCAAATAACAAGGCAGAGAAGGATAATCCTGATGACATTTCACTTGCTGGGGACGGCTTTGACACTGTTATTAAAGCCAAGGCAGCTGTTGATAGCGATCCTCAATGCCGAAACAAAGTCTCCTGTGCTGATATACTCGCTCTGGCTACTAGGGATGTTGCAGGGGGGCCATTTTATAATGTTGAATTAGGAAGGCGTGATGGGAGATTATCTACTATTGCTAGTGTTCAACATCATCTTCCTCACCCTGATTTCAACTTGAATCAACTCAATTCCATGTTTAGCTTTAATGGCCTCTCTCAGACAGATATGATTGCATTATCAGGTGCACATACAATTGGGTTCTCTCATTGCAACAGATTCTCAGGACGAATCTACAACTTTAGCCCCAGAAGAACAATTGACCCAACACTAAATTTGCAATATGCCTTCCAGCTTAGACAAATGTGCCCTTTAAGAGTTGATCCTAGAATTGCCATAAACATGGACCCTGTCACGCCTCAAACGTTTGACAATCAGTACTTCAAGAATTTGCAGCAAGGAAAGGGTCTATTCACTTCTGATGAGGTGCTGTTTACAGATGCAAGGTCAAAGGCCACAGTTAACTTATTTGCATCAAATGAAGGAGCTTTTGATAGTGCTTTTGTTCAGGCTATTACCAAGATGGGAAGGATTGGTGTTAAAACTGGACATCAAGGTGAAATTAGGATTGATTGCACTCGGCCCAACTAG 981 0.4343 MEGPPRFVVLSLVIIMLSITTSTCSAQLTRGFYGKTCPNVEQLVRSAVAQKFQQTFVTAPATLRLFFHDCFVRGCDASILLSSPNNKAEKDNPDDISLAGDGFDTVIKAKAAVDSDPQCRNKVSCADILALATRDVAGGPFYNVELGRRDGRLSTIASVQHHLPHPDFNLNQLNSMFSFNGLSQTDMIALSGAHTIGFSHCNRFSGRIYNFSPRRTIDPTLNLQYAFQLRQMCPLRVDPRIAINMDPVTPQTFDNQYFKNLQQGKGLFTSDEVLFTDARSKATVNLFASNEGAFDSAFVQAITKMGRIGVKTGHQGEIRIDCTRPN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00071 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gabi2179g00071 326 Gene3D - 31 326 - -
Gabi2179g00071 326 FunFam Peroxidase 164 305 - -
Gabi2179g00071 326 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 Gene3D Peroxidase, domain 2 164 305 - -
Gabi2179g00071 326 SUPERFAMILY Heme-dependent peroxidases 27 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Gabi2179g00071 326 ProSiteProfiles Plant heme peroxidase family profile. 27 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PANTHER - 8 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2179g00071 326 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gabi2179g00071 326 FunFam Peroxidase 31 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00071 Gabi-Chr2179 719770 722903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00071 1 326 Peroxidase AT2G18980 71.733 5.07e-174 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00071 K00430 - gmx:100804620 556.599