Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2179g00053 | ATGGACTCATCCTCTTCGCCGCACAACAACAACAACAACAACAACAACTCACTTGGTTTCTCTCTTTCCAATCACTTTCATAATCCTTCATCTTCACACTCTTCCTCTCATCTCTCCCTTTTCAACTCCTTCACCTATCCTTCCACCACACCATCTCTCACACTCACAGGCAGCAACACGGTGGACGCATCACCGGAGGCAACAGACTGCACCGCCGGAGGAGCAACCAACCTCTCTATATTCACCGGCGTACCCAAGTTCGAGGACTTCCTTGGCGGCTCAACCACAACAGCCGCCACGTGTGCACCGCCACAGCTTCCGCAGTTCTCAACCGACAACGACATATACGATTCGGAGCTGAAGACAACAATAGCCGCATGCTTCCCTCGCGGCTTCGCCGCCGAAGCAATCACCGAGTCACAAAAGCCATCCTCCAAGAAAACCGTCGACACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTCACTCGACACAGATGGACTGGGAGATACGAAGCTCATTTATGGGATAACAGTTGCAGAAGGGAAGGGCAAAGCAGGAAAGGAAGACAAGTTTATTTGGGTGGCTACGACAAGGAAGAGAAGGCAGCCAGAGCTTATGATCTCGCAGCTCTCAAGTACTGGGGTCCAACAACAACCACCAACTTTTCAATTTCCAACTATGAGAAGGAACTGGAGGACATGAAGAACATGACAAGGCAAGAGTTTGTTGCTTCTCTACGAAGGAAGAGCAGTGGTTTCTCTAGAGGGGCCTCTATGTACAGAGGAGTGACAAGGCACCACCAGCATGGCCGATGGCAGGCAAGGATAGGCAGAGTAGCCGGAAACAAAGACCTCTATCTTGGAACTTTCAGCACTCAAGAAGAAGCTGCGGAGGCCTATGACATTGCAGCTATCAAATTCAGAGGACTAAATGCAGTCACAAACTTTGACATGAGTCGCTACGACGTTAAGAGCATTGCAAGTAGCACCCTTCCAATTGGTGGTTTATCTAGCAAGAACAAAAACTCCACAGATTCTCTATCTGATGGCAGAAGCCATGAGGCAAGTCGATCAGATGAACGAGATCCATCTTCATCTTCATCTTCATCTGTGACCTTTGCATCGCAACAACCTTCAAGCTCTACCCTTAGCTTTGCCATACCGATAAAGCAAGACCCTTCTTCAGATTACTGGTCCATTCTCGGGTATCACAATCCTCCCCTTGACAGTGCCATAAAGAACACTAACACTAGTGTTACTGCTACTACTAATACAACTTATTTTCCATCTTCCAACATTGGCACTGCATTGCAGTGTTCCAATACCACACCCTTCCACATGGAGTTCTCTAATGCCCCCTCAAATACCAGCAGTGATAACAATGCCGCGTTTTTCAGTGGAGGCATCTTTGTTCAGCAACAAAGTGGAAGCAGTGGTGGTGGTTCTTCTTCAAGTTCAATCCCATTCGCCACGCCCATATTTTCTTTAAATAGTAACAGTAGTTATGAGAACAACCCTGGTTATGGAAACTGGATTGGACCTAACCTGCACACATTCCAAACACATGCAAAACCAAGTCTCTTTCAAACGCCAATATTTGGCATGGAATGA | 1614 | 0.4783 | MDSSSSPHNNNNNNNNSLGFSLSNHFHNPSSSHSSSHLSLFNSFTYPSTTPSLTLTGSNTVDASPEATDCTAGGATNLSIFTGVPKFEDFLGGSTTTAATCAPPQLPQFSTDNDIYDSELKTTIAACFPRGFAAEAITESQKPSSKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFSISNYEKELEDMKNMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIASSTLPIGGLSSKNKNSTDSLSDGRSHEASRSDERDPSSSSSSSVTFASQQPSSSTLSFAIPIKQDPSSDYWSILGYHNPPLDSAIKNTNTSVTATTNTTYFPSSNIGTALQCSNTTPFHMEFSNAPSNTSSDNNAAFFSGGIFVQQQSGSSGGGSSSSSIPFATPIFSLNSNSSYENNPGYGNWIGPNLHTFQTHAKPSLFQTPIFGME | 537 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2179g00053 | 537 | ProSiteProfiles | AP2/ERF domain profile. | 158 | 224 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 157 | 226 | - | - | |
Gabi2179g00053 | 537 | CDD | AP2 | 157 | 226 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | PRINTS | Ethylene responsive element binding protein signature | 159 | 170 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | PRINTS | Ethylene responsive element binding protein signature | 300 | 320 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | FunFam | AP2-like ethylene-responsive transcription factor | 259 | 320 | - | - | |
Gabi2179g00053 | 537 | Gene3D | AP2/ERF domain | 260 | 320 | IPR036955 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | Gene3D | AP2/ERF domain | 158 | 226 | IPR036955 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | SUPERFAMILY | DNA-binding domain | 259 | 320 | IPR016177 | GO:0003677 | |
Gabi2179g00053 | 537 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Gabi2179g00053 | 537 | Pfam | AP2 domain | 261 | 310 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | Pfam | AP2 domain | 158 | 216 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | SUPERFAMILY | DNA-binding domain | 157 | 226 | IPR016177 | GO:0003677 | |
Gabi2179g00053 | 537 | MobiDBLite | consensus disorder prediction | 347 | 362 | - | - | |
Gabi2179g00053 | 537 | MobiDBLite | consensus disorder prediction | 333 | 376 | - | - | |
Gabi2179g00053 | 537 | ProSiteProfiles | AP2/ERF domain profile. | 260 | 318 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 108 | 411 | - | - | |
Gabi2179g00053 | 537 | SMART | rav1_2 | 260 | 324 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | SMART | rav1_2 | 158 | 230 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2179g00053 | 537 | CDD | AP2 | 259 | 320 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2179g00053 | Gabi-Chr2179 | 530898 | 534089 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2179g00053 | 93 | 537 | AP2-EREBP Transcription Factor Family | AT5G57390 | 54.202 | 1.13e-143 | 419 |