Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00031 ATGGAACCTACACATGATGTTCATGATGAGTTCATTTTCCGTTCCAAACTCCCCGACATTTACATCCCAACGCACCTCCCACTCCACACTTACTGCTTCGAAAACCTGTCCCAATTCAAACACCGTCCCTGCCTCATCAACGGCAACACCGGCGAGACATTCAACTACGCCGCCGTTGAACTCACCGCCCGCAAAGTCGCCGCCGGACTCTACAAGCTCGGCATCCAACAAGGCGATGTCATCCTCCTCCTCCTCCAGAACTGCCCCCAATTCGTCTTCGCATTCCTCGGAGCCTCGTACCTCGGCGCCGTCGTCACCACGGCCAACCCGTTCTACACTCCGGCGGAGGTGGCAAAACAGGCGACGGCGTCGAACTCCAAGCTGATCATAACACAATCGTCCTACGTCGACAAAGTTAAGGATTTCGCGAGAGACAATGAAATCAAAGTGGTGTGCATTGACTCGCCGCCGGAAGGTTACTTGCACTTCTCGGAGTTGACGGAGGCCGACGAGGGTGAAATCCCCGCCGTGAAAATATCACCAGACGACGTCATCGCGCTGCCGTATTCGTCTGGGACGACGGGGCTTCCGAAGGGGGTGATGCTAACACACAAAGGGTTAGTTACGAGCGTGGCGCAACAGGTTGACGGAGAGAACCCTAATCTGTATTTTAACAGCGAGGATGTGGTTATTTGCGTGCTGCCACTTTTCCACATTTATTCTCTTAACTCTGTTTTGTTGTGTGGGCTTCGAGTTGGAGCTTCGATTTTAATCATGCAGAAATTCGAGATCATTACGCTGCTGGAGTTGGTTGAGAAACACAAGGTCACCATTGCGCCGTTTGTGCCTCCCATAGTTTTGGCGATTGCCAAGAGTCCTGACATCGACCGATACGACCTGTCGTCCATTCGGATGGTTATGTCTGGTGCCGCACCCATGGGAAAGGAACTTGAGGATGCTGTGAGGGCCAAGCTTCCCAACGCTACACTCGGACAGGGTTACGGGATGACAGAGGCAGGACCAGTGCTAGCAATGTGCTTAGCGTTTGCGAAGGAACCATTGGAGGTGAAATCAGGTGCGTGCGGGACCGTGGTAAGAAATGCGGAGATGAAGATCGTTGACCCTGAGACTGGCGCTTCGCTTCCGAGGAATCAAGCCGGTGAGATTTGCATTAGAGGCAACCAGATCATGAAAGGTTACCTAAACGACCCAGAGGCCACAGAAAGAACTGTAGACAAAGGGGGATGGTTGCACACGGGTGATATTGGTTATATCGATAATAATGATGAACTTTTCATCGTTGATCGGTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTAGCTCCAGCTGAGCTCGAAGCCATGCTGATTGCTCACCCAAACATTTCTGATGCTGCTGTTGTATCCATGAAAGATGAGGTTGCCGGAGAGGTTCCGGTTGCATTTGTTGTACGATCAAACGGTTCTAAAGTCTCAGAGGATGAAATCAAGCAATACATCTCAAAGCAGCAAGATGCATAG 1524 0.5092 MEPTHDVHDEFIFRSKLPDIYIPTHLPLHTYCFENLSQFKHRPCLINGNTGETFNYAAVELTARKVAAGLYKLGIQQGDVILLLLQNCPQFVFAFLGASYLGAVVTTANPFYTPAEVAKQATASNSKLIITQSSYVDKVKDFARDNEIKVVCIDSPPEGYLHFSELTEADEGEIPAVKISPDDVIALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFNSEDVVICVLPLFHIYSLNSVLLCGLRVGASILIMQKFEIITLLELVEKHKVTIAPFVPPIVLAIAKSPDIDRYDLSSIRMVMSGAAPMGKELEDAVRAKLPNATLGQGYGMTEAGPVLAMCLAFAKEPLEVKSGACGTVVRNAEMKIVDPETGASLPRNQAGEICIRGNQIMKGYLNDPEATERTVDKGGWLHTGDIGYIDNNDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVSMKDEVAGEVPVAFVVRSNGSKVSEDEIKQYISKQQDA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00031 507 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Gabi2179g00031 507 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 504 - -
Gabi2179g00031 507 Pfam AMP-binding enzyme 34 443 IPR000873 -
Gabi2179g00031 507 CDD 4CL 22 504 - -
Gabi2179g00031 507 Gene3D - 438 506 IPR045851 -
Gabi2179g00031 507 Gene3D - 4 437 IPR042099 -
Gabi2179g00031 507 SUPERFAMILY Acetyl-CoA synthetase-like 10 504 - -
Gabi2179g00031 507 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 438 - -
Gabi2179g00031 507 Pfam AMP-binding enzyme C-terminal domain 452 503 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00031 Gabi-Chr2179 319997 327465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00031 4 504 Monolignol Biosynthesis Gene Families AT1G51680 70.392 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00031 K01904 - gmx:100779668 893.649