Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00029 ATGAGGAGTGTATACCTTGTTGAAAAGCATCTTTCTCTCGAAATGGCAGCTAATCCACAAGAATTCATCTTCCACTCCAAACTCCCTGACATTTCCATCCCCACTCATCTTCCATTACACTCTTACTGCTTCCAAAACTTGTCCAACTTCAAACACCGCCCTTGCCTCATCAACAGCGACACCGGCGACACCCTCACCTACGCCGAGGTCAAACTCACCGCTCGTAGGATCGCCTCCGGCCTCAACAACCTCGGCATTCGTCGGGGTGACGTCATCATGCTCCTCCTCCGCAACTGTCCCCAGTTCGCCCTCGCTTTTCTAGGGGCATCGCACCGCGGCGCCGCCGTCACCACCGCAAATCCGTTCTACACGCCGGCAGAGCTCGCGAAGCAAGCGGCGGCGACGAACACCAAGCTGATCATAACTCAGGCCGCATACGTCGAGAAAATCAAGGGTTTCGCTGAAAACAACGATGTGATGGTGATGTGCATTGATTCCTCGCCGGAGGATGGTGTTCTGCATTTCTCTGCGCTGACGAACGCTGACGAGAGTGAAGCTCCCGCCGTTAAGATAAGCCCAGACGACGTCGTGGCGATCCCTTTTTCCTCCGGAACATCTGGGCTTCCCAAGGGAGTGATGTTAACGCACAAAAACTTGGTGACGACGGTGGCGCAGCTGGTTGACGGAGAAAACCCGAACCAGTACACTCACAGCGAGGATGTGCTCCTCTGCGTGCTGCCTATGTTTCATATATATGCGCTTAACTCCATTTTGCTGTGCGGGATTCGCGCTGGTGCAGCGGTGCTGATTGTGCAGAAGTTTGAGATTACTACGTTGTTGGAGCTGATCGAGAAGTACAAGGTGACGGTTGCATCGTTTGTCCCACCTATCGTTTTGGCGTTGGTTAAGAGCGGGGATGCTCAGCGATACGACCTGTCGTCTATTCGGGTCTTGATCACGGGTGCTGCACCCATGGGTGTGGAACTCGAAGAAGCAGCGAAGGCTAGGCTACCTCACGCCAAACTTGGACAGGGATATGGAATGACAGAGGCAGGACCACTTTCCCTGAGCTTAGCATTTGCAAAGAAGCCGGTCAAAGCAAAATCAGGTGCATGTGGAACCGTCGTCAGAAATGCAGAGATGAAAATCATAGACAGGGAGACAGGTGTTCCCCTTCCAAGAAACAAAGCTGGTGAAATTTGCGTTAGAGGCACAAAGGTTATGAAAGGATACCTAAATGACCCAGAGGCCACAAAAAGAACTATAGACAAAGAGGGATGGCTACACACAGGTGATATTGGTTACATCGACGATGATGATGAGCTCTTCATTGTTGATCGTCTAAAGGAGCTAATCAAATACAAAGGATTTAAAGTGGCTCCGGCAGAGCTCGAAGCAATGTTGATTGCCCACCCAAACATTTCTGATGCTGCCGTTGTACCCTTGAAAGATGAAGCTGTCGGAGAACTTCCAGTTGCATTTGTTGTAAGATCAAACGGTTCTGAAATCACCGAGGATGAAATCAAGCAATACATTTCACAACAGGTGGTATTTTACAAGAGAATCAACAAAGTTTTCTTCACGGACAACATTCCTAAAGCAGCCTCAGGAAAAATTTTGCGAAAGGAATTAACTGCAAGGCTTACGGAAGGTTTGTTGTCCAATTTGTAA 1671 0.4967 MRSVYLVEKHLSLEMAANPQEFIFHSKLPDISIPTHLPLHSYCFQNLSNFKHRPCLINSDTGDTLTYAEVKLTARRIASGLNNLGIRRGDVIMLLLRNCPQFALAFLGASHRGAAVTTANPFYTPAELAKQAAATNTKLIITQAAYVEKIKGFAENNDVMVMCIDSSPEDGVLHFSALTNADESEAPAVKISPDDVVAIPFSSGTSGLPKGVMLTHKNLVTTVAQLVDGENPNQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLLELIEKYKVTVASFVPPIVLALVKSGDAQRYDLSSIRVLITGAAPMGVELEEAAKARLPHAKLGQGYGMTEAGPLSLSLAFAKKPVKAKSGACGTVVRNAEMKIIDRETGVPLPRNKAGEICVRGTKVMKGYLNDPEATKRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFKVAPAELEAMLIAHPNISDAAVVPLKDEAVGELPVAFVVRSNGSEITEDEIKQYISQQVVFYKRINKVFFTDNIPKAASGKILRKELTARLTEGLLSNL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00029 556 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Gabi2179g00029 556 SUPERFAMILY Acetyl-CoA synthetase-like 21 550 - -
Gabi2179g00029 556 Gene3D - 17 448 IPR042099 -
Gabi2179g00029 556 Gene3D - 449 551 IPR045851 -
Gabi2179g00029 556 FunFam 4-coumarate--CoA ligase 2 450 551 - -
Gabi2179g00029 556 FunFam Long-chain-fatty-acid--CoA ligase FadD 25 449 - -
Gabi2179g00029 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 545 - -
Gabi2179g00029 556 CDD 4CL 33 544 - -
Gabi2179g00029 556 Pfam AMP-binding enzyme 46 454 IPR000873 -
Gabi2179g00029 556 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00029 Gabi-Chr2179 307448 319127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00029 18 516 Monolignol Biosynthesis Gene Families AT1G51680 65.748 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00029 K01904 - gmx:548034 897.501