Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00015 ATGCAGAGGCCGACGAGCGACGCAATTAGTATGGGGAAAAGGACTCTGGAGGGTGGTGAAGATGAGCAGCCTGAACGAAAGAGGCCTGCTCTTGCTAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGTAGAGTTGTGAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGACTTAGCGGAAGGTCTTCTCCTAAAATGATCGAAGGTCCTGATGGCAGAAACTTACAGCTACAGTTTAAGTCCCGGCTGTCTCTTCCCCTATTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCTATTCATGTTGTTCTGATCGATGCCAATAATGGAAAAGTTGTAACATCTGGACCTGAATCCTGTGTGAAGCTTGATGTTGTTGTCCTTGAAGGCGATTTTAACAATGAAGATGATGAAGATTGGACTCAAGAAGATTTTGAAAGCCATGTGGTGAAAGAACGTGAAGGAAAGAGACCTTTGTTGACTGGGGAACTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTGGGGGAACTGACATTTACAGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCCTGAAGGTTGCATCAGGTTTTTGCGAGTCCATACGCATTCGTGAAGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCGTTGAGTGATGAGGTGTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGTTGAATAATGCAGGAATAATCACAGTTGAAGACTTTCTTCGGCTTGTGGTTAAAGATCAACAGAGTTTGCGGAATATTCTTGGGAGTGGTATGTCAAACAAGATGTGGGAGGCTCTCTTAGAGCATGCAAAGACCTGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCAGAAGATACAAGAAATGTTGGTGTTATCTTTAACCACATTTATGAGCTGCGTGGCCTTATAACTGGAGAACAATACTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCATTGGTGAAGAAGGCGTATGACAATTGGGATCAGGTTGTAGAGTATGATGGCAAATCACTTGTGAATGCTAAGCAGAATAATGGATCTGTTGAATCAGAAAATGAACTTCATTTAGAGTCAATTGATTATGGTAGTGCTTTAGATCATCAACTGCAACTGCCGGTCCTCCCAATGTCTGTTCCTTCTGAGCAGCAAATGCATTCAGGGATGCCAGTTGGAGGTTATAACGATAGTATGACAACAAGATATCCAACCCAGTCAGTGATTGCAAACTCCAACTCCCGGAGCCATTTCGACAGCTCATTATATCTGTCTAATGACCAGCTAATCAGCAGTGCTCACCAAACCCATAGCACTAGAAATGATCATGGCACGGTTGGGTTAGCTCTTGGTCCTCCTCAATCATCGACGTCAGGGTTCCATGCTGGCAGCGCTTCTATTCAGCCATCTACCCAAAATCCTTTTGATGATTGGTCACACAATAGGGATAGGGGGGTTGATGAATTGTTTTCAGAAGAAGAAATCCGCATCAAAAGTCACGAGATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATGCCTCCATGAATGCTGAGGATGGCTATTCGTTCCCATCATTCATGCCATCACCGATGCCAAACTACGATGAGGATCGCTCTCGTCCAGGAAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGTTTCTTTATCAGGAAGATAGTAGCTGAGAAGCGGGCACAGCTAGAGGAGTTAGATGAATAG 1905 0.4457 MQRPTSDAISMGKRTLEGGEDEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGRSSPKMIEGPDGRNLQLQFKSRLSLPLFTGGKVEGEQGAPIHVVLIDANNGKVVTSGPESCVKLDVVVLEGDFNNEDDEDWTQEDFESHVVKEREGKRPLLTGELQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTVAFTVKDHRGELYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGIITVEDFLRLVVKDQQSLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDTRNVGVIFNHIYELRGLITGEQYFSADSLTDSQKVYVDSLVKKAYDNWDQVVEYDGKSLVNAKQNNGSVESENELHLESIDYGSALDHQLQLPVLPMSVPSEQQMHSGMPVGGYNDSMTTRYPTQSVIANSNSRSHFDSSLYLSNDQLISSAHQTHSTRNDHGTVGLALGPPQSSTSGFHAGSASIQPSTQNPFDDWSHNRDRGVDELFSEEEIRIKSHEMLENEDMQHLLRLFSMGGHASMNAEDGYSFPSFMPSPMPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIVAEKRAQLEELDE 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00015 634 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Gabi2179g00015 634 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Gabi2179g00015 634 MobiDBLite consensus disorder prediction 14 28 - -
Gabi2179g00015 634 MobiDBLite consensus disorder prediction 1 28 - -
Gabi2179g00015 634 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Gabi2179g00015 634 MobiDBLite consensus disorder prediction 499 525 - -
Gabi2179g00015 634 PANTHER OS02G0177800 PROTEIN 11 557 IPR012416 GO:0005516
Gabi2179g00015 634 MobiDBLite consensus disorder prediction 483 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00015 Gabi-Chr2179 189901 196690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00015 1 629 Calmodulin-binding Proteins AT5G57580 67.293 0.0 860