Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00003 ATGGCAAACAAAGATGGTGAATGCGGGGAAGATCATGCACATGAAATTATGGAAGATGTTGATACTGTATTAAGCAAGACCCCAATTTTAAGTAGAGTTTTTGAGACATCAGAAGATACTTATGTTTTTATGATGCTTATGCAAAAGCAAGGTGTCAAGAGACTACATGATAAAAGAGCTGGTGTTGATAATGTCAAAAGGCAAAGGGATACAAGGACTAATTGTTTGGCAATGTTACAAGTAAGGTTAGTGGATAACCTATGGAAAGTGGAGAAATTCAATGATATACACAATCATCCATTAATTAACACTCCAACAAAGGTGAAGAAGTTTCTTTCTCAGAATGAATTGAGATGCTCAAATTTGACAAAATCTGTTGTTTCTAAGCTATATCAAGAGGGTTTAAGATCTTCAAAAATCTCAAAGGTTGTGAGCGCTATGAACAAAGAGGTTAATCTTACTCCCGTTCAAATCAATAGTATTATATCTAGCCAGCGAAAGAATAATGTGTGGCGAGAATGTCAGGGCATCATCAAACACTTTCAAAAGAAGTCCATGGTTAATGGAACTTTTTATTTTGATATGGATTTGGCAGAAGATGGAACATTAAGAAGCGTATTCTGGGTAGATTGTAGGTCAAGAACTTCATATGCTCATTTTGGTGAAGTCTTTGTCTTTGATGTGACTTACAAAATAAACAAGTTCAGGTTTCCTATTGCTCTTTTTGTGGGGGTTAATCACCATGGGCAGACAATTTTATTTGCTGCCGCTTTGTTAGAAGATGAAACGGAGGCAACATTTACGTGGTTCTTTGAACAATTTCGGACATTTATGTTTGACAAGTCTCCTGTTGCTATTATCACTGATCAAGATAAAGCTATGGGAAAAGCAATAGCCAAGATATTTCCAGGAGCACGACATCGTTTTTGCGCTTGGCATATAAAGAAACATGTTGTGGAGCATAGTCAAGCACTGCGTGCACAATTTAAGGATAGTTTTGATGTTGACTTCCGTGCATGGTATAAAAGTCGAAACATTGATGAGTTTAGAGGCAAATGGGAAGTATCGAGGACTAAATTTGATATTAAAATAGGTAGTTGGTTGGCTAACATGTATGCTTCATGTCATCATTGGGCAAAAACATACTTGAAAGATATATTTTTGCTGGAATGA 1173 0.3623 MANKDGECGEDHAHEIMEDVDTVLSKTPILSRVFETSEDTYVFMMLMQKQGVKRLHDKRAGVDNVKRQRDTRTNCLAMLQVRLVDNLWKVEKFNDIHNHPLINTPTKVKKFLSQNELRCSNLTKSVVSKLYQEGLRSSKISKVVSAMNKEVNLTPVQINSIISSQRKNNVWRECQGIIKHFQKKSMVNGTFYFDMDLAEDGTLRSVFWVDCRSRTSYAHFGEVFVFDVTYKINKFRFPIALFVGVNHHGQTILFAAALLEDETEATFTWFFEQFRTFMFDKSPVAIITDQDKAMGKAIAKIFPGARHRFCAWHIKKHVVEHSQALRAQFKDSFDVDFRAWYKSRNIDEFRGKWEVSRTKFDIKIGSWLANMYASCHHWAKTYLKDIFLLE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00003 390 Pfam MULE transposase domain 223 316 IPR018289 -
Gabi2179g00003 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 388 IPR031052 GO:0006355
Gabi2179g00003 390 Pfam FAR1 DNA-binding domain 45 102 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00003 Gabi-Chr2179 59239 60497 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2179g00003 MULE 1.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00003 - - lsv:128128464 343.199