Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2175g00032 ATGGTTTGCGAGGAAGAGTTGTTGGTCGAAAAAGTCTGCGAGCTTTATGATAAAATCTCAAGCCTAGAGACTCTCAAACCCTGTAAAAATGTCGACAAGCTTTTCACCCAACTTGTTCTCACATGCATGCTACCTAGCCCCATTGATGTTACCAAGCTCAGCACAAGTGTGCAAGAGATTAGATCCAAGCTCATAAGGCTTTGTGGTGAAGCTGAAGGCCATTTGGAGAGCCACTACTCAACCATCCTAGGTTCATACGAGAACTCACTCAATCATCTCCACATTTTCCCCTACTATTCCAATTACCTCAAGCTTGCTCTCCTTGAATTCACTATCCTTAACCAACACTGCACCCATGTCCCTAGCAAAATTGCCTTTGTGGGCTCAGGACCCCTTCCTCTTACTTCAATTGTCTTGGCCTCTAATCACCTAACCACAACTACTTTTCACAACTATGACATTGACCCTTTAGCCAATTCCAAAGCTTTAGGCTTGGTTTCCTCTCATCCTGACTTGTCAAAGCGTATGGTTTTTCACACCAATGATATCTTGGATGTGTCCAATGCTTTGAAAGACTATGATGTTGTTTTCTTGGCTGCCCTTGTGGGCATGGACATTGATGAAAAGAATAAAATCATTGATCACTTAGCTAAGTACATGGCCCCAGGAGCACTCTTGATGCTTAGGAGTGCTCATGGTGCTCGTGCTTTTCTCTATCCAGTGGTTGATCCTAGTGATCTTCGAGGTTTTGAGGTCCTCTCTGTGTTCCACCCTAAAGATGAGGTTATAAATTCAGTTGTCATAGCACGTAAGTACCCTATGCCTATGCTACAAAACAAGTGTTCTGATGAGATGCAAGCCTTCAACCCTGTCAACCTTGGAAATGTGATTGACGAATTGGTCATTGAGGAGAAGCTATAG 921 0.4343 MVCEEELLVEKVCELYDKISSLETLKPCKNVDKLFTQLVLTCMLPSPIDVTKLSTSVQEIRSKLIRLCGEAEGHLESHYSTILGSYENSLNHLHIFPYYSNYLKLALLEFTILNQHCTHVPSKIAFVGSGPLPLTSIVLASNHLTTTTFHNYDIDPLANSKALGLVSSHPDLSKRMVFHTNDILDVSNALKDYDVVFLAALVGMDIDEKNKIIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPSDLRGFEVLSVFHPKDEVINSVVIARKYPMPMLQNKCSDEMQAFNPVNLGNVIDELVIEEKL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2175g00032 306 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Gabi2175g00032 306 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Gabi2175g00032 306 PANTHER NICOTIANAMINE SYNTHASE 3 4 286 IPR004298 GO:0030410|GO:0030418
Gabi2175g00032 306 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2175g00032 Gabi-Chr2175 258360 259321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2175g00032 3 271 Nicotianamine Synthase Gene Family AT1G56430 66.176 9.75e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2175g00032 K05953 - qsa:O6P43_011034 490.73