Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2175g00020 ATGATTGCATTTAGGGGTCAAATTAGGACGGGCCGGGCTCCAGGGGCTTACGGCTCGGCCTACGTCAGAGGAGATGATTGTGGTGGCATGACAATTTCAGATAATATCACTGTGGCACAGTATGGCAAAGCAAATTTCACAACGATTCAAGCTGCCATTGATACAATACCAGTCAACAATAACAGATGGGTGAAAATTTATATAAGTGCTGGCATGTACAGGGAGAAGGTTAATATTCCCTATAATAAACCATGCATCATCTTGGAAGGCCAAGGCAGAGACGTCACCATCATTACATACAATGGCCATCTAGAAACAGATACCAGTGCCACGTTCACTTCTTCTCCAAGCAATGTTGTTGCAAAGGAAATTACTTTTGAGAATTCGTACAATATGGCCGCAATTTTGCATTTGCACTATAAAAAAATTGAAAACTATGCCATGCCAGCCTTAGCGGCAAGGGTATATGGAGACAAATCGGCCTTTTACAATTGTAGTTTCGTTGGTTATCAAGATACATTATGGGACGTAGAAGGTCGTCATTACTTCAAAAACTGCACTATTATTGGTGCTGTAGACTTCATATTTGGCGCGGGTCAATCCATTTACGAGGATTGTCTAATTGTGGCGACTTCCGCGGGTTTCATAACGGCCCAAGGACGCAATTCACTGAATGACACGAGTGGTTTTATATTTCGACGGGGTACTGTGTTTGGTTGGGAAAAAACGTTCTTAGGAAGAGCTTGGGGTCCTTATTCCAGAGTTATATTTTATGAAACAAACTTAACTTCCGCGGTTGCTCCTCTAGGATGGTATTCTTGGACTTATGCACAACATGAGGACAAATTTACCTATGCTGAGATTGACTGTAAAGGGTTATCTGCTAATACTACACATCGCGCCCAGTGGATGAACAAGACGATCCCAGTCAATGCTTCACAAATGATGAGTCAATTTTCGATATCAGCATTCATTGATCAAGATGGATGGCTTGGAAAATTACCGATGTGA 1011 0.4204 MIAFRGQIRTGRAPGAYGSAYVRGDDCGGMTISDNITVAQYGKANFTTIQAAIDTIPVNNNRWVKIYISAGMYREKVNIPYNKPCIILEGQGRDVTIITYNGHLETDTSATFTSSPSNVVAKEITFENSYNMAAILHLHYKKIENYAMPALAARVYGDKSAFYNCSFVGYQDTLWDVEGRHYFKNCTIIGAVDFIFGAGQSIYEDCLIVATSAGFITAQGRNSLNDTSGFIFRRGTVFGWEKTFLGRAWGPYSRVIFYETNLTSAVAPLGWYSWTYAQHEDKFTYAEIDCKGLSANTTHRAQWMNKTIPVNASQMMSQFSISAFIDQDGWLGKLPM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2175g00020 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 331 - -
Gabi2175g00020 336 FunFam Pectinesterase 30 335 - -
Gabi2175g00020 336 ProSitePatterns Pectinesterase signature 2. 188 197 IPR033131 -
Gabi2175g00020 336 SUPERFAMILY Pectin lyase-like 30 333 IPR011050 -
Gabi2175g00020 336 Pfam Pectinesterase 35 327 IPR000070 GO:0030599|GO:0042545
Gabi2175g00020 336 Gene3D - 29 335 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2175g00020 Gabi-Chr2175 173377 177168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2175g00020 16 280 Carbohydrate Esterase AT2G19150 45.055 4.80e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2175g00020 - - gmx:100800737 380.948