Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2175g00017 ATGGCACCTTTCGAACCGAACATAGATTCCACGATGCGAGAATCCAATCACAAGAAGAGAAGGAAAATCGGAGAGCATCAAAATTCGCTCGATCTCATAGCGTGGAGATCCGAGGCGGAGCAGCAGATCTACTCCTCCAGGCTCGTCGAAGCTCTCCGCAGGAATCCTTCCCCTGCGGCGACAAAGCCTAGAGCCGCCGGTAAGGTCCGCGAGACCGCCGACCGAGTCCTCGCCGCGACGGCCAAGGGAAGAACGCGGTGGAGCCGCGCGATTCTCGGCCGGTGGAAGAAACTGCAGAGGAAGCACAAGAAAGTGAAGAGAACCGCCACCGGATTGAAGAGAGCCGGGATTGGCGAAGAGAGGAGGAGACAGCGGTTACCGCCGGTGCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTCCCCGGTTGCCATAAGCTCTCGTTCCCGAACCTTCTCGAAGAAGCGACTGACTATATTTCCGCCTTGGAGATGCAAGTTCGAGCCATGACGGCTCTCGCCGAGCTACTTTCCGGTGGCGCGTCGACTGAACTCGCCGGTCACATGTTGAGTTGA 573 0.5812 MAPFEPNIDSTMRESNHKKRRKIGEHQNSLDLIAWRSEAEQQIYSSRLVEALRRNPSPAATKPRAAGKVRETADRVLAATAKGRTRWSRAILGRWKKLQRKHKKVKRTATGLKRAGIGEERRRQRLPPVQKKARVLSRLVPGCHKLSFPNLLEEATDYISALEMQVRAMTALAELLSGGASTELAGHMLS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2175g00017 190 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 36 176 IPR044660 GO:0006355
Gabi2175g00017 190 CDD bHLH_AtIBH1_like 119 173 IPR044549 GO:0006355
Gabi2175g00017 190 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 113 162 IPR011598 GO:0046983
Gabi2175g00017 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 178 IPR036638 GO:0046983
Gabi2175g00017 190 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2175g00017 Gabi-Chr2175 154894 155790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2175g00017 6 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.809 1.89e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2175g00017 - - gmx:100783462 259.996