Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2175g00003 ATGTTGAAAATGGGTATTAATGGGAATTCAGATTCAGAGGCAGCAGCGATTGAGATAAAGAATCTTCGATTTACATACCCTGGCATCGACGGCCATCCTCCGCCGGGTTCCACTCCTCTCATTCAAGATTTCTCTCTCACTCTCAATTCCGGCTATCGCTGTCTTCTCGTTGGATCCAATGGCGCTGGCAAGACCACCATACTCAAGATACTAGGAGGGAAACACATGGTGGAGCCAGAAATGGTTCGTGTGCTCGGAAGATCAGCTTTTCATGACACCACTTTAGCATCTTCTGGTGATCTCTGTTATCTTGGTGGTGAGTGGAGGCGAGATGTTGCTTTTGCAGGTTTTGATGTTCCAATACAAATGGACATTTCTGCAGAAAAAATGATATTTGGCGTAGGTGGGATTGATCCAGAAAGAAGAGCAGAGCTAATCAAGGTACTAGATATCAATCTTTCCTGGAGATTGCATAAAGTATCAGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAGACCATTCAAGGTTCTTCTTCTCGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTGCTGAGGTTTCTAAGAAAGGAATGTGAAGAAAGGGGGGCCACTATTATCTATGCAACACATATATTCGACGGTCTTGAGGATTGGCCAACACATATTGTTTATGTAGCCCATGGAAAGCTACAACTAGCAATGCCTATGGACAAAGTCAGAGAACTTAGCAAACTATCTCTAATGAGAACAATAGAAAGTTGGCTGCGGAAAGAACGCGATGAAGATAGAAAGAAAAGGAAAGAGAGGAAGGCAGCTGGTCTTCCTGAATTTGCAGAGCAAGTTGATGGAAGCCGTGTAACAGGAGATCCAGCACGTGCTGCTGTTCGAGTAGTTAATAATGGCTGGGCAGCAGGACGATTACATTCCACCATTGCTGGTGAGGAAAACTTTCTCCTCAGCGCCAACCGAGTATTGAGGCAGTAG 1008 0.4454 MLKMGINGNSDSEAAAIEIKNLRFTYPGIDGHPPPGSTPLIQDFSLTLNSGYRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTTLASSGDLCYLGGEWRRDVAFAGFDVPIQMDISAEKMIFGVGGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLRPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTHIVYVAHGKLQLAMPMDKVRELSKLSLMRTIESWLRKERDEDRKKRKERKAAGLPEFAEQVDGSRVTGDPARAAVRVVNNGWAAGRLHSTIAGEENFLLSANRVLRQ 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2175g00003 335 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 260 IPR003439 GO:0005524
Gabi2175g00003 335 SMART AAA_5 50 237 IPR003593 GO:0016887
Gabi2175g00003 335 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 15 262 - -
Gabi2175g00003 335 Pfam ABC transporter 42 187 IPR003439 GO:0005524
Gabi2175g00003 335 Gene3D - 2 280 IPR027417 -
Gabi2175g00003 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 252 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2175g00003 Gabi-Chr2175 23968 26979 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2175g00003 17 214 Calmodulin-binding Proteins AT2G36910 24.186 4.19e-09 56.2