Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2175g00001 ATGGAGAGTAGCGTCGTCATTCCATTCTTAGCTATGGTTCTTGTGCAATTGAGCTATGCAGGGATGAATATTATCTCGAAGTTTGCATTACAATCTGGCATGAACCCTCTTGTTCTTGTTGCTTATCGTCAAATCTTTGCAACTCTAACCCTTGCTCCCTTCGCTTATTGGTTGGAACGGAAAACGGTTCCCCGGATCACAATGCGCATCGGTTTCCAGATATTATTATCTTCTTTAACAGGAATTACAGGAAATCAGGTACTGTACTTCGTGGGGCTAAAATATTCAACCCCTACAATTGCAACTGCACTACTCAATTTACTCCCAGCTTTCACTTTTGTCCTTGCAGTCCTCTTCAGACAAGAATCTGTGAGAATCAAGACGAGGGCCGGGCAAGCAAAGGTGTTAGGGACAGTCCTCAGCGTTAGTGGAGCACTGCTTTTATCATTTTACCATGGAAAAACTCTCCATCTAGGCGAGTCAAGTATTCATTGGAGTTATGCAGACAAAATGGAAGCAGCAACTTCTTCCGGTAGTGGAAGAACAAACTTGCTTCTAGGCCCTGTTGCCTTAATTATTAGTACTCTTAGTTGGGCAGTATGGTTCATAATTCAAACAGACATGAGCAAGAACTTTCGAGCTCCTTGTACGTGCAGCTTCTACATGTGTTTGCTGGCAAGTATTCAGTGCGTAGCCATTGCATTGTGTTTTGAACACAAGGTCTCAGCTTGGTCACTCCACAATACTATGGGACTTACCTCTGCACTTTATGCGGGAATTATTAGCAGTGGACTAGTGTATTTTCTCATTTCATGGACCATTGAGAGGAAAGGTCCTCTCTATGTCTCTGTATTCACCCCTTTGCTGCTTGTCATCATTGCTGTTGTCAGCTGGGCTCTGCTTCACGAGAAATTATATGTTGGCACTGCCGTAGGGTCTGTCCTGATAGTTTTCGGGCTCTATGCTGTTTTGTGGGGAAAGGGTAAAGAGATGAATAAGAAAGATGATATTCAAGAGACAGTCACAGAAGCAATCAAGGATAAAGAACAGGATGAGATTAATGACCTGGAATTGCAATCCTATGATCCTTCTAATGGAAATGGCAGCCATGGGATTCAAAAAAGATGA 1128 0.4291 MESSVVIPFLAMVLVQLSYAGMNIISKFALQSGMNPLVLVAYRQIFATLTLAPFAYWLERKTVPRITMRIGFQILLSSLTGITGNQVLYFVGLKYSTPTIATALLNLLPAFTFVLAVLFRQESVRIKTRAGQAKVLGTVLSVSGALLLSFYHGKTLHLGESSIHWSYADKMEAATSSGSGRTNLLLGPVALIISTLSWAVWFIIQTDMSKNFRAPCTCSFYMCLLASIQCVAIALCFEHKVSAWSLHNTMGLTSALYAGIISSGLVYFLISWTIERKGPLYVSVFTPLLLVIIAVVSWALLHEKLYVGTAVGSVLIVFGLYAVLWGKGKEMNKKDDIQETVTEAIKDKEQDEINDLELQSYDPSNGNGSHGIQKR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2175g00001 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 329 - -
Gabi2175g00001 375 Pfam EamA-like transporter family 9 149 IPR000620 GO:0016020
Gabi2175g00001 375 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Gabi2175g00001 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Gabi2175g00001 375 PANTHER WAT1-RELATED PROTEIN 8 336 IPR030184 GO:0016020|GO:0022857
Gabi2175g00001 375 MobiDBLite consensus disorder prediction 354 375 - -
Gabi2175g00001 375 MobiDBLite consensus disorder prediction 357 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2175g00001 Gabi-Chr2175 15172 17737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2175g00001 1 369 Nodulin-like Gene Family AT1G09380 56.640 9.47e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2175g00001 - - gmx:100802059 549.28