Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2172g00026 ATGTCATCAATGGGGGTGCAAAGAATTGCAAGCCAGATGATTCCCACTCCTGGATTTACTGTCAGCAGTAATCACTCACACATGAATATAGATTCTACTACTACTGTCAATGCCTTTTCCAGTGTAGAGTCTACAATGGTCTCACAGTCACAGTTGCAGCAGCAGAAGCTGCATGTTGGTGGCCAAAATAGTCATGTTTTGCAGAACCTTAGCAGCCAAATGGGTAGTGCAATGAGATCTGGTTTACTACAAAAATCATTTGCAAACTCAAATGGTGCTATAAATAGTGGGCTAGGCTTGATTGGAAACAATATACTTGTAAACGAAACTGGCACTTCTGACAGCTATGCCTCAACTTATGCTAATTCCCCTAAACACATACAGCAGCACTTTGATCAAAATCAGAAACCAATAGTGCAGGGTGATGGATATGGATTGAATAATGTTGACACTTTTGCTTCTGGAAACTTCTATGCATCTGCGACATCCTCTGGGTCTATGATGAACTCTCAGAACACGAATTCAGTAAAATTGCCATCAATACCCAAAACTACCTCATTGATAAGTGGTCACTCGAATTTGCACAGTATGCAGCAGGCTGCTCATATAAAGTCTCAAGCAATTAATCAGTTGGAAAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGACGGCCTTCTGCATTCTCAGCAGCAATATCAGCAAAGGCCCCAACAATTTCAACAGCCAGAGCAGTTTGCACAACAGCAATTTCAACTGAAGCTGCAAAGTCAACTGACTCAGCATTTGGTCAACAGTGATACTTTCAGTCAGTCTCAGCCGTCTTGCAATGTAGAAGAAAATCGAGTGAAGTCTGAGCCTGGAATAGAACACCATAAAGAAGTGCTCAATTCTCACGTTTCTGAAAAGTTCCACATGTCTGACATGCATATACAGTTCCAGCCGAACTCATCCGAAGATTGCTCTAGAGGTGCTCAGCATCTTTCATTTCCATCTGGGCAGCATGATTTATCCTCATCAACAACTCCAAGTTCGCAACAAATGGTGCACCCACACCAATTGGTTGCAGAGCCTCAAAATAATTTTAGCTGTCTTACTGTTGGGGCACAATCCAAACCAGTAGTTCTAAACCAATGGACTCAATCACATGATGGAAACCACGTGCCTGACAATATTTCACATGACCAGCATCTCCAAATGGATTTCTATCAAAGAATATCAGGGCAAGATGAAGCACAGTGCAATAATTTATCATCTGATGGATCTATTATTGGTCAAGCTGTTCCTTCTAGAGGCTCAGCTGAGCTGCTAGACTCAGGAAGTGCTATCAAAAAGGAGCACAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCAAGACGATGTCCTGCCCCTGAAGGACGATGCCAAGAACGCTTTTGTTCTATTGCGCAAAAGTTATGTAAGCATATAGATGGATGTACCCTACGTCATTGTCCATATCCTCGTTGTCATCATACCAGGGAATTGCTTCATCATTTCAAAAATTGCAGAGATCCATGTTGCCCTGTATGTGTTTCTGTCAGAAATTATCGACGTGCATTTCAACTCAAGCCTCAAATTCGGCTGGAACCTGAATCTAGTTTGCCAGTTGCAGGAAATGGATCCTGTAAATCCTACAATACTGTAGACGCATCACCTAGATTGATCTCGAAGCCTCTATTAGTTGTTGAAACTTCAGAAGACCTGCACCACCCATCTCTAAAACGTATAAAGATTGAGCATTGCATCCAGTCTGTTAATCCTGAAAATGACAATTCTGCTTCATCTGTTTCTGCAAATTGCGAATCTCATGTTTCTAGGGATGCACAGTCCCAAGCTTATCCCAATGCTGAGAAGTCTATCTCAATTAAATCTGAGCTAACAGAACTTAAGGAGGAAGCTCCTGCACATTTGGTGCATGAAAAGCTTAGCGAGATGAAGATGGATAATAATAATGCAGATGATAAACTACCTGGTGGTGAACCTGCTAATTTTGCTAGGCCAGAAAATATTAAAACGGATAAAGAAACTGGACGAGATAAGCAAGAAAATGTGATGCAGCCATCTGAAAATGCAGCTGGAACCAAGTCTGGTAAGCCCAAAATAAAGGGGGTCTCATTAACTGAATTATTTACTCCAGAGCAAGTCAGGGAGCATATCGCTGGCCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCGATGAGTGAGAACTCCTGTCAATTGTGTGCTGTAGAGAAGCTTACGTTCGAACCACCTCCTATTTATTGCACAACTTGTGGGGTTCGCATTAAGCGAAATAATATGTATTATACCATGGGTACTGGTGATACAAGGCATTATTTTTGCATTCCATGCTATAATGATGCTCGTACAGAGAGCATCAATGTTGATGGCACTCCCGTTGCGAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACCGAGGAATGGTGGGTTCAATGTGATAAATGCAATGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTAGGAGAAATGATGGTGGAGAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCGAGCCTTTACCCCAAAGTGCTGTACTTGGAGCCAAGGATTTGCCTAGAACTATTCTCAGTGACCATATAGAACAAAGATTATTTAAACGGCTAAAGCATGAAAGACAAGAGAGGGCGAGGCTTCACGGGAAAAGTTATGATGAGGTGCCTGGAGCTGAAGCTCTTGTTGTAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTAAAGCAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACTGAATTCCCATATAAATCCAAGGTAATATTGCTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTCCAAGAATTTGGATCTGAATGTCAATTCCCCAATCAGCGCCGGGTGTATCTATCATATTTGGACTCTGTGAAGTATTTTAGGCCTGAAGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAAAAGCGTGGTTTCACAAGCTGTTATATATGGGCCTGTCCTCCATTAAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCCGATAAGCTTCGAGAATGGTATCTATCCATGCTAAGAAAAGCTGCCAAGGAGAATATTGTGGTCGATCTTACCAACTTATATGATCATTTCTTCGTATCTACTGGTGAATGTAGGGCTAAGGTTACAGCTGCAAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAGGAGGAAGATGGTAGAAAACAAAATAAGAAGGGAACAACTAAAAAATCCATAACAAAAAGGGCTTTAAAAGCGTCTGGTCAGTCAGATCTTTCAGGAAATGCCTCGAAAGATCTGCTTCTCATGCACAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGTATGTACTAACTGTTGTATTCTAATGGTGTCTGGCAACCGTTGGCTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAACTAAAGCGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAGAAACATACTCTTTATCCAGTTGAAATTACTGATGTACCATCTGATACAAAGGACAAAGATGACATTCTTGAGAGTGAATTCTTTGACACTAGACAAGCATTTCTGAGTCTCTGCCAGGGAAATCATTATCAATATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTGACAACTTGTAATATATGTTATCGTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCATAAGGATGGAGGCATTGACCATCCTCATAAGTTGACAAATCATCCGTCAATGGTTGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTATTGCAGCTTCGAAAAATGCTTGATCTCCTTGTGCATGCTTCCCAATGTCGTTCTGCACATTGCCAATATCCAAATTGTCGCAAGGTGAAGGGGCTTTTCCGCCATGGGATGCATTGCAAAACACGTGCTTCCGGGGGCTGTGTTCTTTGTAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGATTGCCACGTACCACGTTGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAACAGTCTGATTCACGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCCGCAGAAGTTGCCAACAATGCTGGATGA 4518 0.415 MSSMGVQRIASQMIPTPGFTVSSNHSHMNIDSTTTVNAFSSVESTMVSQSQLQQQKLHVGGQNSHVLQNLSSQMGSAMRSGLLQKSFANSNGAINSGLGLIGNNILVNETGTSDSYASTYANSPKHIQQHFDQNQKPIVQGDGYGLNNVDTFASGNFYASATSSGSMMNSQNTNSVKLPSIPKTTSLISGHSNLHSMQQAAHIKSQAINQLEKLNFQSSLTSRDGLLHSQQQYQQRPQQFQQPEQFAQQQFQLKLQSQLTQHLVNSDTFSQSQPSCNVEENRVKSEPGIEHHKEVLNSHVSEKFHMSDMHIQFQPNSSEDCSRGAQHLSFPSGQHDLSSSTTPSSQQMVHPHQLVAEPQNNFSCLTVGAQSKPVVLNQWTQSHDGNHVPDNISHDQHLQMDFYQRISGQDEAQCNNLSSDGSIIGQAVPSRGSAELLDSGSAIKKEHRNQQRWLLFLLHARRCPAPEGRCQERFCSIAQKLCKHIDGCTLRHCPYPRCHHTRELLHHFKNCRDPCCPVCVSVRNYRRAFQLKPQIRLEPESSLPVAGNGSCKSYNTVDASPRLISKPLLVVETSEDLHHPSLKRIKIEHCIQSVNPENDNSASSVSANCESHVSRDAQSQAYPNAEKSISIKSELTELKEEAPAHLVHEKLSEMKMDNNNADDKLPGGEPANFARPENIKTDKETGRDKQENVMQPSENAAGTKSGKPKIKGVSLTELFTPEQVREHIAGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNDARTESINVDGTPVAKSRLEKKKNDEETEEWWVQCDKCNAWQHQICALFNGRRNDGGEAEYTCPNCYIQEVERGEREPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKHERQERARLHGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKSITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHVCTNCCILMVSGNRWLCNQCKNFQICDKCYEAELKREERERHPINQREKHTLYPVEITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYRDIETGQGWRCEVCPEYDVCNACYHKDGGIDHPHKLTNHPSMVDRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESDCHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2172g00026 1505 Gene3D TAZ domain 1384 1501 IPR035898 -
Gabi2172g00026 1505 CDD PHD_HAC_like 799 871 - -
Gabi2172g00026 1505 SMART zz_5 1326 1372 IPR000433 GO:0008270
Gabi2172g00026 1505 SMART zz_5 1206 1250 IPR000433 GO:0008270
Gabi2172g00026 1505 ProSiteProfiles Zinc finger TAZ-type profile. 441 522 IPR000197 -
Gabi2172g00026 1505 FunFam Histone acetyltransferase of the CBP family 12 1203 1262 - -
Gabi2172g00026 1505 ProSiteProfiles Zinc finger ZZ-type profile. 1327 1380 IPR000433 GO:0008270
Gabi2172g00026 1505 MobiDBLite consensus disorder prediction 657 709 - -
Gabi2172g00026 1505 MobiDBLite consensus disorder prediction 676 691 - -
Gabi2172g00026 1505 Pfam Histone acetylation protein 929 1148 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gabi2172g00026 1505 Gene3D TAZ domain 439 527 IPR035898 -
Gabi2172g00026 1505 SMART TAZ_2 445 522 IPR000197 -
Gabi2172g00026 1505 SMART TAZ_2 1390 1468 IPR000197 -
Gabi2172g00026 1505 ProSiteProfiles Zinc finger ZZ-type profile. 1207 1270 IPR000433 GO:0008270
Gabi2172g00026 1505 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 889 1325 IPR031162 GO:0004402
Gabi2172g00026 1505 ProSiteProfiles Zinc finger TAZ-type profile. 1387 1470 IPR000197 -
Gabi2172g00026 1505 Gene3D - 1326 1380 IPR043145 -
Gabi2172g00026 1505 Pfam Zinc finger, ZZ type 1329 1362 IPR000433 GO:0008270
Gabi2172g00026 1505 SUPERFAMILY RING/U-box 1187 1261 - -
Gabi2172g00026 1505 MobiDBLite consensus disorder prediction 314 345 - -
Gabi2172g00026 1505 MobiDBLite consensus disorder prediction 1151 1177 - -
Gabi2172g00026 1505 Pfam TAZ zinc finger 1397 1467 IPR000197 -
Gabi2172g00026 1505 Pfam TAZ zinc finger 451 519 IPR000197 -
Gabi2172g00026 1505 ProSitePatterns Zinc finger ZZ-type signature. 1332 1359 IPR000433 GO:0008270
Gabi2172g00026 1505 SMART PHD_3 773 872 IPR001965 -
Gabi2172g00026 1505 Gene3D - 1203 1262 IPR043145 -
Gabi2172g00026 1505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 824 872 IPR013083 -
Gabi2172g00026 1505 SUPERFAMILY RING/U-box 1308 1376 - -
Gabi2172g00026 1505 PANTHER CBP/P300-RELATED 33 1496 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gabi2172g00026 1505 FunFam Histone acetyltransferase HAC1 1326 1377 - -
Gabi2172g00026 1505 SUPERFAMILY TAZ domain 1389 1472 IPR035898 -
Gabi2172g00026 1505 MobiDBLite consensus disorder prediction 597 625 - -
Gabi2172g00026 1505 FunFam Histone acetyltransferase HAC1-like protein 1384 1501 - -
Gabi2172g00026 1505 SUPERFAMILY FYVE/PHD zinc finger 833 873 IPR011011 -
Gabi2172g00026 1505 SUPERFAMILY TAZ domain 447 526 IPR035898 -
Gabi2172g00026 1505 SMART KAT11_2 922 1219 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gabi2172g00026 1505 ProSitePatterns Zinc finger PHD-type signature. 800 871 IPR019786 -
Gabi2172g00026 1505 Pfam PHD-finger 830 872 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2172g00026 Gabi-Chr2172 249860 277202 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gabi2172g00026 HAT_KAT11 9.2e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2172g00026 K04498 - gmx:100809207 2687.91