Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2172g00025 ATGAAGCTACAGGCACATATTTCGGGGCAGATATCAGGACAGGTACCTAATCAAGCAGGGTCTCAGTTGCCTGGACTGACCCAAGTGAATGGGAATGCCATCCCTCCTCAGATGCCAACTTTAGGTGGTATACAACGTTCAACAATTAATATGGATCCTGAATTTCTAAGAGCACGTTCATTTATTCAAGAAAAGATCTGGGATATGTTATTGCAACGACAACCGCAGCCAGTTACAGAAGTACAGAGAAGGAAGTATAAAGATCTTGCAAAACGCCTAGAGGAGGCCATGTTGAAAGCTGCTCTCTCTAAGGAGGATTACATGAATTTGGAAACCCTAGAGAGTCGTTTATCAAATGTCATCATACGAGCATCTATGAATAATCACAACCAACAGTATCCGCAGCTTGTTAGCTCTTCTCCAATTGGTACAATGATACCAACCCCTGGTATGTCGCATGTTCCAAATTCAAACATGGTGGTTGCATCGTCTATGGATGCCTCAATGATTTCTGGCAGTGGTTGTAATAGCATAGTATCAACATCTTTCAATAGTGTAAGCATGTTACCAGCTGCTGGCATGCTTGGCAGTTCCTTAAATAGATCTGATGGTTTGTCTAATGGTTATCAGCAGTCTTCTACGAGCTTTTCTGTTGGCTCAGGGGGGAATATGTCATCAATGGGGGTGCAAAGAATTGCAAGCCAGATGATTCCCACTCCTGGATTTACTGTCAGCAGTAATCACTCACACATGAATATAGATTCTACTACTACTGTCAATGCCTTTTCCAGTGTAGAGTCTACAATGGTCTCACAGTCACAGTTGCAGCAGCAGAAGCTGCATGTTGGTGGCCAAAATAGTCATGTTTTGCAGAACCTTAGCAGCCAAATGGGTAGTGCAATGAGATCTGGTTTACTACAAAAATCATTTGCAAACTCAAATGGTGCTATAAATAGTGGGCTAGGCTTGATTGGAAACAATATACTTGTAAACGAAACTGGCACTTCTGACAGCTATGCCTCAACTTATGCTAATTCCCCTAAACACATACAGCAGCACTTTGATCAAAATCAGAAACCAATAGTGCAGGGTGATGGATATGGATTGAATAATGTTGACACTTTTGCTTCTGGAAACTTCTATGCATCTGCGACATCCTCTGGGTCTATGATGAACTCTCAGAACACGAATTCAGTAAAATTGCCATCAATACCCAAAACTACCTCATTGATAAGTGGTCACTCGAATTTGCACAGTATGCAGCAGGCTGCTCATATAAAGTCTCAAGCAATTAATCAGTTGGAAAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGACGGCCTTCTGCATTCTCAGCAGCAATATCAGCAAAGGCCCCAACAATTTCAACAGCCAGAGCAGTTTGCACAACAGCAATTTCAACTGAAGCTGCAAAGTCAACTGACTCAGCATTTGGTCAACAGTGATACTTTCAGTCAGTCTCAGCCGTCTTGCAATGTAGAAGAAAATCGAGTGAAGTCTGAGCCTGGAATAGAACACCATAAAGAAGTGCTCAATTCTCACGTTTCTGAAAAGTTCCACATGTCTGACATGCATATACAGTTCCAGCCGAACTCATCCGAAGATTGCTCTAGAGGTGCTCAGCATCTTTCATTTCCATCTGGGCAGCATGATTTATCCTCATCAACAACTCCAAGTTCGCAACAAATGGTGCACCCACACCAATTGGTTGCAGAGCCTCAAAATAATTTTAGCTGTCTTACTGTTGGGGCACAATCCAAACCAGTAGTTCTAAACCAATGGACTCAATCACATGATGGAAACCACGTGCCTGACAATATTTCACATGACCAGCATCTCCAAATGGATTTCTATCAAAGAATATCAGGGCAAGATGAAGCACAGTGCAATAATTTATCATCTGATGGATCTATTATTGGTCAAGCTGTTCCTTCTAGAGGCTCAGCTGAGCTGCTAGACTCAGGAAGTGCTATCAAAAAGGAGCACAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCAAGACGATGTCCTGCCCCTGAAGGACGATGCCAAGAACGCTTTTGTTCTATTGCGCAAAAGTTATGTAAGCATATAGATGGATGTACCCTACGTCATTGTCCATATCCTCGTTGTCATCATACCAGGGAATTGCTTCATCATTTCAAAAATTGCAGAGATCCATGTTGCCCTGTATGTGTTTCTGTCAGAAATTATCGACGTGCATTTCAACTCAAGCCTCAAATTCGGCTGGAACCTGAATCTAGTTTGCCAGTTGCAGGAAATGGATCCTGTAAATCCTACAATACTGTAGACGCATCACCTAGATTGATCTCGAAGCCTCTATTAGTTGTTGAAACTTCAGAAGACCTGCACCACCCATCTCTAAAACGTATAAAGATTGAGCATTGCATCCAGTCTGTTAATCCTGAAAATGACAATTCTGCTTCATCTGTTTCTGCAAATTGCGAATCTCATGTTTCTAGGGATGCACAGTCCCAAGCTTATCCCAATGCTGAGAAGTCTATCTCAATTAAATCTGAGCTAACAGAACTTAAGGAGGAAGCTCCTGCACATTTGGTGCATGAAAAGCTTAGCGAGATGAAGATGGATAATAATAATGCAGATGATAAACTACCTGGTGGTGAACCTGCTAATTTTGCTAGGCCAGAAAATATTAAAACGGATAAAGAAACTGGACGAGATAAGCAAGAAAATGTGATGCAGCCATCTGAAAATGCAGCTGGAACCAAGTCTGGTAAGCCCAAAATAAAGGGGGTCTCATTAACTGAATTATTTACTCCAGAGCAAGTCAGGGAGCATATCGCTGGCCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCGATGAGTGAGAACTCCTGTCAATTGTGTGCTGTAGAGAAGCTTACGTTCGAACCACCTCCTATTTATTGCACAACTTGTGGGGTTCGCATTAAGCGAAATAATATGTATTATACCATGGGTACTGGTGATACAAGGCATTATTTTTGCATTCCATGCTATAATGATGCTCGTACAGAGAGCATCAATGTTGATGGCACTCCCGTTGCGAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACCGAGGAATGGTGGGTTCAATGTGATAAATGCAATGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTAGGAGAAATGATGGTGGAGAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCGAGCCTTTACCCCAAAGTGCTGTACTTGGAGCCAAGGATTTGCCTAGAACTATTCTCAGTGACCATATAGAACAAAGATTATTTAAACGGCTAAAGCATGAAAGACAAGAGAGGGCGAGGCTTCACGGGAAAAGTTATGATGAGGTGCCTGGAGCTGAAGCTCTTGTTGTAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTAAAGCAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACTGAATTCCCATATAAATCCAAGGTAATATTGCTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTCCAAGAATTTGGATCTGAATGTCAATTCCCCAATCAGCGCCGGGTGTATCTATCATATTTGGACTCTGTGAAGTATTTTAGGCCTGAAGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAAAAGCGTGGTTTCACAAGCTGTTATATATGGGCCTGTCCTCCATTAAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCCGATAAGCTTCGAGAATGGTATCTATCCATGCTAAGAAAAGCTGCCAAGGAGAATATTGTGGTCGATCTTACCAACTTATATGATCATTTCTTCGTATCTACTGGTGAATGTAGGGCTAAGGTTACAGCTGCAAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAGGAGGAAGATGGTAGAAAACAAAATAAGAAGGGAACAACTAAAAAATCCATAACAAAAAGGGCTTTAAAAGCGTCTGGTCAGTCAGATCTTTCAGGAAATGCCTCGAAAGATCTGCTTCTCATGCACAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGTATGTACTAACTGTTGTATTCTAATGGTGTCTGGCAACCGTTGGCTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAACTAAAGCGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAGAAACATACTCTTTATCCAGTTGAAATTACTGATGTACCATCTGATACAAAGGACAAAGATGACATTCTTGAGAGTGAATTCTTTGACACTAGACAAGCATTTCTGAGTCTCTGCCAGGGAAATCATTATCAATATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTGACAACTTGTAATATATGTTATCGTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCATAAGGATGGAGGCATTGACCATCCTCATAAGTTGACAAATCATCCGTCAATGGTTGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTATTGCAGCTTCGAAAAATGCTTGATCTCCTTGTGCATGCTTCCCAATGTCGTTCTGCACATTGCCAATATCCAAATTGTCGCAAGGTGAAGGGGCTTTTCCGCCATGGGATGCATTGCAAAACACGTGCTTCCGGGGGCTGTGTTCTTTGTAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGATTGCCACGTACCACGTTGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAACAGTCTGATTCACGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCCGCAGAAGTTGCCAACAATGCTGGATGA 5187 0.4166 MKLQAHISGQISGQVPNQAGSQLPGLTQVNGNAIPPQMPTLGGIQRSTINMDPEFLRARSFIQEKIWDMLLQRQPQPVTEVQRRKYKDLAKRLEEAMLKAALSKEDYMNLETLESRLSNVIIRASMNNHNQQYPQLVSSSPIGTMIPTPGMSHVPNSNMVVASSMDASMISGSGCNSIVSTSFNSVSMLPAAGMLGSSLNRSDGLSNGYQQSSTSFSVGSGGNMSSMGVQRIASQMIPTPGFTVSSNHSHMNIDSTTTVNAFSSVESTMVSQSQLQQQKLHVGGQNSHVLQNLSSQMGSAMRSGLLQKSFANSNGAINSGLGLIGNNILVNETGTSDSYASTYANSPKHIQQHFDQNQKPIVQGDGYGLNNVDTFASGNFYASATSSGSMMNSQNTNSVKLPSIPKTTSLISGHSNLHSMQQAAHIKSQAINQLEKLNFQSSLTSRDGLLHSQQQYQQRPQQFQQPEQFAQQQFQLKLQSQLTQHLVNSDTFSQSQPSCNVEENRVKSEPGIEHHKEVLNSHVSEKFHMSDMHIQFQPNSSEDCSRGAQHLSFPSGQHDLSSSTTPSSQQMVHPHQLVAEPQNNFSCLTVGAQSKPVVLNQWTQSHDGNHVPDNISHDQHLQMDFYQRISGQDEAQCNNLSSDGSIIGQAVPSRGSAELLDSGSAIKKEHRNQQRWLLFLLHARRCPAPEGRCQERFCSIAQKLCKHIDGCTLRHCPYPRCHHTRELLHHFKNCRDPCCPVCVSVRNYRRAFQLKPQIRLEPESSLPVAGNGSCKSYNTVDASPRLISKPLLVVETSEDLHHPSLKRIKIEHCIQSVNPENDNSASSVSANCESHVSRDAQSQAYPNAEKSISIKSELTELKEEAPAHLVHEKLSEMKMDNNNADDKLPGGEPANFARPENIKTDKETGRDKQENVMQPSENAAGTKSGKPKIKGVSLTELFTPEQVREHIAGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNDARTESINVDGTPVAKSRLEKKKNDEETEEWWVQCDKCNAWQHQICALFNGRRNDGGEAEYTCPNCYIQEVERGEREPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKHERQERARLHGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKSITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHVCTNCCILMVSGNRWLCNQCKNFQICDKCYEAELKREERERHPINQREKHTLYPVEITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYRDIETGQGWRCEVCPEYDVCNACYHKDGGIDHPHKLTNHPSMVDRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESDCHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2172g00025 1728 MobiDBLite consensus disorder prediction 880 932 - -
Gabi2172g00025 1728 SUPERFAMILY RING/U-box 1410 1484 - -
Gabi2172g00025 1728 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1112 1548 IPR031162 GO:0004402
Gabi2172g00025 1728 ProSitePatterns Zinc finger ZZ-type signature. 1555 1582 IPR000433 GO:0008270
Gabi2172g00025 1728 ProSiteProfiles Zinc finger TAZ-type profile. 1610 1693 IPR000197 -
Gabi2172g00025 1728 SMART PHD_3 996 1095 IPR001965 -
Gabi2172g00025 1728 SMART zz_5 1549 1595 IPR000433 GO:0008270
Gabi2172g00025 1728 SMART zz_5 1429 1473 IPR000433 GO:0008270
Gabi2172g00025 1728 MobiDBLite consensus disorder prediction 1374 1400 - -
Gabi2172g00025 1728 PANTHER CBP/P300-RELATED 85 1719 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gabi2172g00025 1728 ProSitePatterns Zinc finger PHD-type signature. 1023 1094 IPR019786 -
Gabi2172g00025 1728 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1047 1095 IPR013083 -
Gabi2172g00025 1728 Gene3D - 1426 1485 IPR043145 -
Gabi2172g00025 1728 Gene3D TAZ domain 1607 1724 IPR035898 -
Gabi2172g00025 1728 SMART KAT11_2 1145 1442 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gabi2172g00025 1728 FunFam Histone acetyltransferase HAC1 1549 1600 - -
Gabi2172g00025 1728 SUPERFAMILY RING/U-box 1531 1599 - -
Gabi2172g00025 1728 Pfam TAZ zinc finger 674 742 IPR000197 -
Gabi2172g00025 1728 Pfam TAZ zinc finger 1620 1690 IPR000197 -
Gabi2172g00025 1728 MobiDBLite consensus disorder prediction 820 848 - -
Gabi2172g00025 1728 FunFam Histone acetyltransferase of the CBP family 12 1426 1485 - -
Gabi2172g00025 1728 FunFam Histone acetyltransferase HAC1-like protein 1607 1724 - -
Gabi2172g00025 1728 Pfam Zinc finger, ZZ type 1552 1585 IPR000433 GO:0008270
Gabi2172g00025 1728 SUPERFAMILY FYVE/PHD zinc finger 1056 1096 IPR011011 -
Gabi2172g00025 1728 SMART TAZ_2 668 745 IPR000197 -
Gabi2172g00025 1728 SMART TAZ_2 1613 1691 IPR000197 -
Gabi2172g00025 1728 SUPERFAMILY TAZ domain 1612 1695 IPR035898 -
Gabi2172g00025 1728 MobiDBLite consensus disorder prediction 899 914 - -
Gabi2172g00025 1728 Pfam Histone acetylation protein 1152 1371 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gabi2172g00025 1728 CDD PHD_HAC_like 1022 1094 - -
Gabi2172g00025 1728 ProSiteProfiles Zinc finger TAZ-type profile. 664 745 IPR000197 -
Gabi2172g00025 1728 SUPERFAMILY TAZ domain 670 749 IPR035898 -
Gabi2172g00025 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1550 1603 IPR000433 GO:0008270
Gabi2172g00025 1728 Gene3D - 1549 1603 IPR043145 -
Gabi2172g00025 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1430 1493 IPR000433 GO:0008270
Gabi2172g00025 1728 Pfam PHD-finger 1053 1095 IPR019787 -
Gabi2172g00025 1728 Gene3D TAZ domain 662 750 IPR035898 -
Gabi2172g00025 1728 MobiDBLite consensus disorder prediction 537 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2172g00025 Gabi-Chr2172 249860 279102 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gabi2172g00025 HAT_KAT11 1.1e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2172g00025 K04498 - gmx:100809207 3042.68