Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2172g00005 ATGGCGATGTTGCTTGCTCTTGTCATTCTATGCATATATTTGTTTCGCGGTACAACTCCTCAACAGGAATCTTCTGGCTTGGGAAGGTCAACTTCTGCATACATCACTGTAGCTGCATTCCTTTTAGGTGCCCTTTGTTCAGGTATTGCTGGATATGTAGGGATGTGGGTATCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGTTCTGCAAGAGAGGCATTACAGATAGCTACTCGTGCAGGTGGTTTATCTGCTATCGTTGTTGTTGGTATGGCTGTAATTGGTATATCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCGTCAGGTTCGATGAAGGTTACTGATTTGCCCCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTGTTTGCTCAGTTGGGGGGTGGAATATTCACAAAAGCAGCTGATGTTGGAGCGGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGATCCCAGGAATCCTGCTGTTATTGCTGATCTGGTTGGTGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAAATAATCAGTGCCATGATACTTGGGGGAACAATGGCACAACGCTGTAAAATTGAAGATCCGTCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCAGTTGGAATATTTTCAATTAGGGGTACGCGTGAATCTGGAGTAATGGTTCCTATGGAAGATCCGATGACAATTCTTCAAAAAGGATATTCTGTTACAATAGTGTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATACTGAGCAAGCACCATCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACAGCTTATGTTTTTGTTTGGATCACCAAGTATTATACTGACTACAAGCATGAACCTGTGCGCACATTAGCCCTTTCTAGCTCTACGGGTCATGGAACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCAACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTATCTCAGCTTTCTGGCTGGGCCAGACCTCTGGACTAGTAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGCACTGCTGTGGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACCATGGATATGTTTGGTCCAATAGCAGATAATGCGGGAGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACCGATGTCCTTGATGCCGTGGGGAACACAACCAAAGCCACCACCAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTTCTACATTTTCTCATGAACCTTTTAAGCAGGTTGATATTGCAATTCCAGAAGTTTTTGTTGGTGGGTTGTTGGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCGGATTATGGTCGCTGTGTTGCTATCGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCTCTGGCAATCATTTCACCTGTTGTAGTTGGTTTTCTGTTCCGAATTTTGGGCTACTATACAGGGCATCCCTTACTCGGGGCTAAAGTCGTGGCTGCTTTACTGATGTTTGCAACAGTGTCTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCAGTAACTGGAGATACAGTAGGGGACCCATTCAAAGACACAGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACAATCACGCTCGTAATGGCTCCAGTCTTCCTGTGA 2040 0.4451 MAMLLALVILCIYLFRGTTPQQESSGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIATRAGGLSAIVVVGMAVIGISVLYATFYVWLGVDSSGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIFTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMVPMEDPMTILQKGYSVTIVLAVLAFGLSTRWLLYTEQAPSAWFNFALCGLVGIITAYVFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGQTSGLVDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFSHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPVVVGFLFRILGYYTGHPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPVFL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2172g00005 679 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 2 678 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00005 679 NCBIfam V-type H(+)-translocating pyrophosphatase 3 678 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00005 679 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 679 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00005 679 PIRSF H+-PPtase 1 679 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00005 679 Pfam Inorganic H+ pyrophosphatase 5 674 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2172g00005 Gabi-Chr2172 47849 64607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2172g00005 1 679 Primary Pumps ATPases AT1G16780 89.838 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2172g00005 K23025 - vvi:100247980 1226.08