Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2172g00003 ATGATGGATGATGACATGGAGAGTGGTACTTTGGGGCCATACCAGGACAGGCCAAGAACTTTCCCCAACATGCGTAGTAAAGCTTACACCCCACTGATATTTCGTATTCTACTGGGTATAAATGTTCGTGTCCTGTTCATTCTTTTGCTCCTGGGGTTTGGAGCTATCTTTTACGTGGGAGCTAGTACATCTCCAATCATTGTGTTTGTCATCTCTGTTTGTATTCTCAGCTTCCTTGTGTCGTTATATCTTACAAAGTGGGTGCTGGCAAAAGATGAGGGCCCCCCCGAAATGGTTCAGATAGCAGATGCTATACGAGATGGAGCTGAAGGATTTATCAGGACACAGTATGGGAGTATATCCAAGATGGCGATGTTGCTTGCTCTTGTCATTCTATGCATATATTTGTTTCGCGGTACAACTCCTCAACAGGAATCTTCTGGCTTGGGAAGGTCAACTTCTGCATACATCACTGTAGCTGCATTCCTTTTAGGTGCCCTTTGTTCAGGTATTGCTGGATATGTAGGGATGTGGGTATCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGTTCTGCAAGAGAGGCATTACAGATAGCTACTCGTGCAGGTGGTTTATCTGCTATCGTTGTTGTTGGTATGGCTGTAATTGGTATATCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCGTCAGGTTCGATGAAGGTTACTGATTTGCCCCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTGTTTGCTCAGTTGGGGGGTGGAATATTCACAAAAGCAGCTGATGTTGGAGCGGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGATCCCAGGAATCCTGCTGTTATTGCTGATCTGGTTGGTGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAAATAATCAGTGCCATGATACTTGGGGGAACAATGGCACAACGCTGTAAAATTGAAGATCCGTCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCAGTTGGAATATTTTCAATTAGGGGTACGCGTGAATCTGGAGTAATGGTTCCTATGGAAGATCCGATGACAATTCTTCAAAAAGGATATTCTGTTACAATAGTGTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATACTGAGCAAGCACCATCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACAGCTTATGTTTTTGTTTGGATCACCAAGTATTATACTGACTACAAGCATGAACCTGTGCGCACATTAGCCCTTTCTAGCTCTACGGGTCATGGAACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCAACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTATCTCAGCTTTCTGGCTGGGCCAGACCTCTGGACTAGTAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGCACTGCTGTGGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACCATGGATATGTTTGGTCCAATAGCAGATAATGCGGGAGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACCGATGTCCTTGATGCCGTGGGGAACACAACCAAAGCCACCACCAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTTCTACATTTTCTCATGAACCTTTTAAGCAGGTTGATATTGCAATTCCAGAAGTTTTTGTTGGTGGGTTGTTGGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCGGATTATGGTCGCTGTGTTGCTATCGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCTCTGGCAATCATTTCACCTGTTGTAGTTGGTTTTCTGTTCCGAATTTTGGGCTACTATACAGGGCATCCCTTACTCGGGGCTAAAGTCGTGGCTGCTTTACTGATGTTTGCAACAGTGTCTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCAGTAACTGGAGATACAGTAGGGGACCCATTCAAAGACACAGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACAATCACGCTCGTAATGGCTCCAGTCTTCCTGTGA 2406 0.4456 MMDDDMESGTLGPYQDRPRTFPNMRSKAYTPLIFRILLGINVRVLFILLLLGFGAIFYVGASTSPIIVFVISVCILSFLVSLYLTKWVLAKDEGPPEMVQIADAIRDGAEGFIRTQYGSISKMAMLLALVILCIYLFRGTTPQQESSGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIATRAGGLSAIVVVGMAVIGISVLYATFYVWLGVDSSGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIFTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMVPMEDPMTILQKGYSVTIVLAVLAFGLSTRWLLYTEQAPSAWFNFALCGLVGIITAYVFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGQTSGLVDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFSHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPVVVGFLFRILGYYTGHPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPVFL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2172g00003 801 NCBIfam V-type H(+)-translocating pyrophosphatase 69 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00003 801 Pfam Inorganic H+ pyrophosphatase 75 796 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00003 801 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 64 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00003 801 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 91 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi2172g00003 801 PIRSF H+-PPtase 60 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2172g00003 Gabi-Chr2172 47849 66782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2172g00003 1 801 Primary Pumps ATPases AT1G16780 87.516 0.0 1444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2172g00003 K23025 - gmx:100787805 1428.31