Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2171g00026 ATGGCTGAGGAGGACTGGGATCTCTTCGCCATCGTGCGAAGCTGCCAATCAGCAACCACAGAAAATCCACCTACGGCTACCACCACCTCTTCCTTTGCCACTTCTAGTACTGTCAAGGACGAACATGACGCATTTTCTTTTCCCAACATGGTGCAACAACCTGTAACCAATGAGTTCCAAGAACTAAACCAATTGCTCACACCCTTTAATACCACTACCACAAGTGGTCATGGTATCAATCCCAATTCGCATGATTTTGCACCATGCATTACACAACAAGAAACGATCCAAGCAGCCCACCATCCTCCTCTGCATTTTATGCCAGAACCCTCCACTTCTAGTTTCAACAGATTCCACGACCAACAACAAGTACTTCAGAAACAAGAAAATTTAGTACCCGAAACCAGTTCTGCTATAGCTTTACCAAACACGCAATCTCAAACACCCAGATCAAGAAGAAGAAAAAGCCAACACAAGAAAATGGTGTGCCAAGTAACAGCAGATAACCTTTCAGCTGATTTGTGGGCATGGCGTAAATATGGACAAAAACCCATTAAGGGTTCTCCATATCCAAGGAACTATTACAAGTGCAGCAGCTCCAAAGGTTGTGCAGCACGAAAGCAAGTTGAACGAAGCAACACTGAAGCCAACATGTTCATCGTCACCTACACCGGAGACCACACGCATCCCATACCCACCCACCGGAACTCGCTCGCTGGAAGTACCCGGAGCAAGTCTCCCACGATGCATCCACCGCCAACGCCACCAGAACAAGGATCATCCAATTCAATCTCCTTCCAGGCCAACACTACAGCTTCGTCTTCCTCATCAGCACACTCTCCGGCGACGCCATCGGTAGACCCGCAGGGAAACGACCCGACTGGAGAGGAAGTAGAACCGGACCCGGAAATGGAAACTGATGACGAGGACGTCGAAGATAAAGTTTACATTTGGTAA 957 0.4796 MAEEDWDLFAIVRSCQSATTENPPTATTTSSFATSSTVKDEHDAFSFPNMVQQPVTNEFQELNQLLTPFNTTTTSGHGINPNSHDFAPCITQQETIQAAHHPPLHFMPEPSTSSFNRFHDQQQVLQKQENLVPETSSAIALPNTQSQTPRSRRRKSQHKKMVCQVTADNLSADLWAWRKYGQKPIKGSPYPRNYYKCSSSKGCAARKQVERSNTEANMFIVTYTGDHTHPIPTHRNSLAGSTRSKSPTMHPPPTPPEQGSSNSISFQANTTASSSSSAHSPATPSVDPQGNDPTGEEVEPDPEMETDDEDVEDKVYIW 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2171g00026 318 MobiDBLite consensus disorder prediction 229 247 - -
Gabi2171g00026 318 Pfam WRKY DNA -binding domain 173 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2171g00026 318 MobiDBLite consensus disorder prediction 134 160 - -
Gabi2171g00026 318 Gene3D WRKY domain 154 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2171g00026 318 MobiDBLite consensus disorder prediction 134 150 - -
Gabi2171g00026 318 SUPERFAMILY WRKY DNA-binding domain 168 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2171g00026 318 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 303 IPR044810 GO:0003700
Gabi2171g00026 318 MobiDBLite consensus disorder prediction 225 318 - -
Gabi2171g00026 318 FunFam WRKY transcription factor 22 154 225 - -
Gabi2171g00026 318 SMART WRKY_cls 171 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2171g00026 318 MobiDBLite consensus disorder prediction 294 312 - -
Gabi2171g00026 318 MobiDBLite consensus disorder prediction 259 290 - -
Gabi2171g00026 318 ProSiteProfiles WRKY domain profile. 166 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2171g00026 Gabi-Chr2171 264656 266269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2171g00026 116 255 WRKY Transcription Factor Family AT5G52830 57.595 6.55e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2171g00026 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2171g00026 - - aprc:113871802 358.607