Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2170g00007 ATGGGACTGAGAGATCTTCATATCAAGCTAAAAGCATTCCGGGTGAAACACTTTTTCTTAGGAAATGGAGGCAGAAAGAGAAATCATGGGACTATAAACAAGCCTTCATGGATGACGCCAATAACACATGGTCACCATTTGGTGGCGCATCATCTTATCAAAGGTGGTTCTCATGACTCAGACTTTGATTCAGTTGTGATACAGAGAGAGCAAATGGATGACACAGAATGGTGGTATTTTGGAATCTTTGATGCTCTCATTGGAGATGGAGTTACTAAGTATATGCAATCCCATTTCTTTGACAAGAAACTGAAAGTGTCTCATATGAGGACAAAAACCAAAGAAACACTCAAGAGAGCTTACCTAGGTGCAAGAACAAAGATCAGAGAGGCACACAAATCAGAAGAGACATGCAGAATAGGCTCAACATCTGTGATGGTGATAAATGGAGAAAAACTTGTGATAGCCAACATGGGAGATTACAAAACTGTTTTGTGTAGAGATGGTATAGCTTATGCTTATCAGCCAAACGGCAGAGGCAAACAATCAGCCAAGAGACATTGGTATCGCAGACTCTTTTCAGCCAAAAAGACAGGTATAAAGCATTCTAAAGGCTCAGAACTTGTCCTGGGAGGTGATAGGATCGACTCTGATACTGAATTTTTGATCTTAGCAAGCAAAGGCATATGGGAGGTGATGAAGAACCAAGAGGCCGTGAATCTTATTAGGCACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAGGGAAGCTTTGAATAGGATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGATTGA 831 0.4116 MGLRDLHIKLKAFRVKHFFLGNGGRKRNHGTINKPSWMTPITHGHHLVAHHLIKGGSHDSDFDSVVIQREQMDDTEWWYFGIFDALIGDGVTKYMQSHFFDKKLKVSHMRTKTKETLKRAYLGARTKIREAHKSEETCRIGSTSVMVINGEKLVIANMGDYKTVLCRDGIAYAYQPNGRGKQSAKRHWYRRLFSAKKTGIKHSKGSELVLGGDRIDSDTEFLILASKGIWEVMKNQEAVNLIRHIEDPQEAAECLAREALNRMSKSNISCLIIRFD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2170g00007 276 Gene3D - 42 206 IPR036457 -
Gabi2170g00007 276 Gene3D - 209 276 IPR036457 -
Gabi2170g00007 276 PANTHER PROTEIN PHOSPHATASE 44 274 IPR015655 GO:0004722|GO:0006470
Gabi2170g00007 276 SMART PP2C_4 40 273 IPR001932 -
Gabi2170g00007 276 SUPERFAMILY PP2C-like 46 276 IPR036457 -
Gabi2170g00007 276 ProSiteProfiles PPM-type phosphatase domain profile. 59 275 IPR001932 -
Gabi2170g00007 276 Pfam Protein phosphatase 2C 72 172 IPR001932 -
Gabi2170g00007 276 Pfam Protein phosphatase 2C 215 268 IPR001932 -
Gabi2170g00007 276 CDD PP2Cc 54 275 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2170g00007 Gabi-Chr2170 65770 67807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2170g00007 1 275 PP2C-type Phosphatase Gene Family AT3G23360 44.643 1.21e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2170g00007 K19704 - gmx:100794054 437.958