Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2165g00008 ATGGAGATGAAGAAAGAGGTTACCGTAACAAGGTCTCAAAACAAAGCGAGGCTTGCCATTTTGGAAATAGCACACATGATGAGTGTCCCAATGTCTCTCGTTGCCGTCATCAAAATGAAGGTTCCCGACACCATATGGCAAGACGGTTCTAACACTCCCCTCTCTGCCGCCCAGATTATCGACCGCATTCGCCCTCACGGAGGCGCTGATGCTGAGAACCTCCAGCGCATCCTCCGCTTGCTCACCAGTTATGACATTTTTGCCGAGCACTTGAGCAGCACCGGCGAAAGAAAATACTTCCTCACCAACGTCGGCAAAACTCTTGTTGCCGATGACGAAGGTCTATCCTACGCGCCTTACATGCTCCAGCACCATCAGGATGCGTTGATGCGAGCTTGGCCGTTGGTGGAGGAGGCAGTGGAGGATCCAACGGTGGAGCCATTCGCGAAGGTGAACGGAGAATCAGCATTACCATATTACATGAAGCAGCCAGATATAGCGGATTTGTATCATAAGGGCTTATATGGGATGTCCGTACCCTTCATGAGGGATATGTTGGAGCTCTACGATGGCTTCCAAGGAGTGAAGACACTAGTTGACGTTGGTGGCAATTCTGGCGTGTCTCTACGCATGATAATGGAGAAACACCCAAATATACTTCAGGGCATCAACTATGATCTTCCCGATATGGTGGCTCTTGCACCACAGTTTCCAGGTATAACCCATGTCGGTGGAGATGCGTTTGAATCTGTCCCTCCTGGGGATGCTATCTTCATGAAGTGGGTATTTTCAGGATGGACAGATGAAGAATGCAAGCAGGTCTTGGAGAATTGTTATAAGGCACTTTCAGTTGACGGAAAATTGATTGTTTGCGAGCCGGTGGCGCCAGAGTTAACCGATGAGAGTCAAAGAACACGAGCATTGCTTGCGGGTGACATATTCGTAATGACAATTACTAAGGGGAAGCACAGGACTGAACAACAATTTAAACACCTCGCCATTTCTGCTGTTAGAGAGCCATATGATCAACTCTTTGAAAGTGAGATCAAATCTGAACCATTAGATGGACAAAAATATGGATGGACAGCAATGCAATTTCTTGGAGCTCTTTAG 1113 0.4771 MEMKKEVTVTRSQNKARLAILEIAHMMSVPMSLVAVIKMKVPDTIWQDGSNTPLSAAQIIDRIRPHGGADAENLQRILRLLTSYDIFAEHLSSTGERKYFLTNVGKTLVADDEGLSYAPYMLQHHQDALMRAWPLVEEAVEDPTVEPFAKVNGESALPYYMKQPDIADLYHKGLYGMSVPFMRDMLELYDGFQGVKTLVDVGGNSGVSLRMIMEKHPNILQGINYDLPDMVALAPQFPGITHVGGDAFESVPPGDAIFMKWVFSGWTDEECKQVLENCYKALSVDGKLIVCEPVAPELTDESQRTRALLAGDIFVMTITKGKHRTEQQFKHLAISAVREPYDQLFESEIKSEPLDGQKYGWTAMQFLGAL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2165g00008 370 SUPERFAMILY "Winged helix" DNA-binding domain 14 111 IPR036390 -
Gabi2165g00008 370 Gene3D Vaccinia Virus protein VP39 114 341 IPR029063 -
Gabi2165g00008 370 PIRSF O-mtase 1 349 IPR016461 GO:0008168
Gabi2165g00008 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Gabi2165g00008 370 Pfam O-methyltransferase domain 136 335 IPR001077 GO:0008171
Gabi2165g00008 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 335 IPR029063 -
Gabi2165g00008 370 Gene3D - 3 113 IPR036388 -
Gabi2165g00008 370 PANTHER O-METHYLTRANSFERASE 24 333 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2165g00008 Gabi-Chr2165 197258 205750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2165g00008 10 336 Monolignol Biosynthesis Gene Families AT3G53140 60.961 3.69e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2165g00008 - - ccaj:109819366 490.345