Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2165g00002 ATGGAGATGAAGAAGGAAGTTACCATAACAAGGTCTCAAAACAAAGCGAGGCTTGCCATTTTGGAAATAGCACACATGATGAGTGTTCCAATGTCTCTCGTTGCTGTCATCAATATGAAGGTACCCGACACCATATGGCAAGCTGGTTCCAACACTCCCCTCTCCGCTTCACAAATTCTTTCTCACATTCGTCCCCACGGTGGTGGCGACGCCGAGAACCTCCAGCGCATCCTCCGCTTGCTCACCAGTTATGACATTTTTGCCGAGCACTTGAGCAGCACTGGCGAAAGAAAATACTTCCTCACCGACGTCGGCAAAACTTTAGTTGCCAGTGACGAAGGTCTATCCTACGCGCCCTACGTGCTCCAACACCATCAGGATGCGTTGATGCGAGCTTGGCCGTTGGTGGGGGAGGCAGTGGAGGATCCAACGGTGGAGCCATTCGAGAAGGCGAACGGAGAATCAGCAATAGCACATTACATGAAGCAGCCAGATATAATGGATTTGATATATAAGTCCTTATCTGGGATGTCCGTACCCTTCATGAGGGAAATGTTGGAGCTCTACGATGGCTTCCAAGGGGTGAAGACACTAGTTGACGTTGGTGGCAATTCTGGTGTGAGTCTCCGCATGATAATGGAGAAATACCCAAATATACTTAAGGGCATCAACTATGATCTTCCCGATATGGTGGCTCTTGCACCACAGTTTCCAGGTATAACTCATATCGGTGGTGACGCGTTTGAATCTGTTCCTGCTGGGGATGCTATCTTCATGAAGTGGGTATTTATAGCATGGACGGATGAAGAATGCAAGCAGGTCTTGGAAAATTGTTATAAGGCACTTCCGGTGAACGGAAAATTGATTGCTTGCGAGCCGGTGGTGCCAGAGCTGACCGATGAGAGTCAAAGAACAAGAGCATTGCTTGGAGGTGACATATTTATCATGACAATGTATAAAACTAAGGGGAAGCATAGGACTGAACAACAATTTAAACATCTTGCCACTTCTGCTGGTTTTCCTCACTTCCGTGCCTTCTATGTTGATCCTTATTTGGCTGTACTTGAGTTTCAGAAATAA 1080 0.4704 MEMKKEVTITRSQNKARLAILEIAHMMSVPMSLVAVINMKVPDTIWQAGSNTPLSASQILSHIRPHGGGDAENLQRILRLLTSYDIFAEHLSSTGERKYFLTDVGKTLVASDEGLSYAPYVLQHHQDALMRAWPLVGEAVEDPTVEPFEKANGESAIAHYMKQPDIMDLIYKSLSGMSVPFMREMLELYDGFQGVKTLVDVGGNSGVSLRMIMEKYPNILKGINYDLPDMVALAPQFPGITHIGGDAFESVPAGDAIFMKWVFIAWTDEECKQVLENCYKALPVNGKLIACEPVVPELTDESQRTRALLGGDIFIMTMYKTKGKHRTEQQFKHLATSAGFPHFRAFYVDPYLAVLEFQK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2165g00002 359 SUPERFAMILY "Winged helix" DNA-binding domain 14 110 IPR036390 -
Gabi2165g00002 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Gabi2165g00002 359 Gene3D - 2 108 IPR036388 -
Gabi2165g00002 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Gabi2165g00002 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Gabi2165g00002 359 PANTHER O-METHYLTRANSFERASE 24 346 IPR016461 GO:0008168
Gabi2165g00002 359 Pfam Dimerisation domain 31 82 IPR012967 GO:0046983
Gabi2165g00002 359 Pfam O-methyltransferase domain 136 340 IPR001077 GO:0008171
Gabi2165g00002 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2165g00002 Gabi-Chr2165 58247 63354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2165g00002 10 359 Monolignol Biosynthesis Gene Families AT3G53140 62.429 9.01e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2165g00002 - - ccaj:109819366 537.339