Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2165g00001 ATGGAGATGAAGAAGGAGGTTACACTAACAAGGTCTCAAAACAAAGAGAGACTTGCCATTTTGGAAATAGCACACATGATGAGTGTCCCAATGTCTCTCGTTGCCGTCATCAATATGAAGGTACCCGACACCATATGGCAAGCTGGTTCCAACACTCCCCTCTCCGCCTCCCAGATTATCGCCCGCATTCGCCCCCATGGCGGCCCTGATGCCGAGAACCTCCAGCGCGTCCTCCGCTTGCTCACCACTTATGACATTTTTTCCGAGCACTTGAGCAGCACCGGCGAAAGAAAATACTTCCTTACCGATGTTGGCAAAACTCTTGTTGCCGATGACGAAGGTCTATCCTACGCGCCCTACGTGCTCCAGCACCATCAGGATGCCTTGATGCGAGCTTGGCCGTTGGTGGGGGAGGCAGTGGAGGATCCAACGGTGGAGCCATTCGAGAAGGCGAACGGAGAATCAGCAATAGCACATTACATGAAGCAGCCAGATATAATGGATTTGATATATAAGTCCTTATCTGGGATGTCCGTACCCTTCATGAGGGAAATGTTGGAGCTCTACGATGGCTTCCAAGGGGTGAAGACACTAGTTGACGTTGGTGGCAATTCTGGTGTGAGTCTCCACATGATAATGGAGAAATACCCAAATATACTTAAGGGCATCAACTATGATCTTCCCGATATGGTGGCTCTTGCACCACAGTTTCCAGGTATAACTCATGTCGGTGGTGACGCGTTAGAATCAGTTCCGGCTGGGGATGCTATCTTCATGAAGTGGATATTTTTGGCATGGACAGATGAAGAATGCAAGCAGGTCTTCGAGAATTGTTATAAGGCACTTCCGGTGAACGGAAAATTGATTGCTTGCGAGCCGGTGGTGCCGGAGTTGACCGATGAGAGTCAAAGAACAAGAGCATTGCTTGGGGGTGACATATTCATAATGACAATGTATAAAACTAAGGGGAAGCATAGGACTGAACAACAATTTAAACATCTTGCCACTTCTGCTGGTTTTTCTCATTTCCGTGCCTTCTGTATTGATCCTTATTTGGCTGTACTTGAGTTTCAGAAATAA 1080 0.4769 MEMKKEVTLTRSQNKERLAILEIAHMMSVPMSLVAVINMKVPDTIWQAGSNTPLSASQIIARIRPHGGPDAENLQRVLRLLTTYDIFSEHLSSTGERKYFLTDVGKTLVADDEGLSYAPYVLQHHQDALMRAWPLVGEAVEDPTVEPFEKANGESAIAHYMKQPDIMDLIYKSLSGMSVPFMREMLELYDGFQGVKTLVDVGGNSGVSLHMIMEKYPNILKGINYDLPDMVALAPQFPGITHVGGDALESVPAGDAIFMKWIFLAWTDEECKQVFENCYKALPVNGKLIACEPVVPELTDESQRTRALLGGDIFIMTMYKTKGKHRTEQQFKHLATSAGFSHFRAFCIDPYLAVLEFQK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2165g00001 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Gabi2165g00001 359 PANTHER O-METHYLTRANSFERASE 24 343 IPR016461 GO:0008168
Gabi2165g00001 359 Gene3D - 2 108 IPR036388 -
Gabi2165g00001 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Gabi2165g00001 359 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
Gabi2165g00001 359 Pfam O-methyltransferase domain 136 341 IPR001077 GO:0008171
Gabi2165g00001 359 Pfam Dimerisation domain 31 82 IPR012967 GO:0046983
Gabi2165g00001 359 SUPERFAMILY "Winged helix" DNA-binding domain 15 111 IPR036390 -
Gabi2165g00001 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2165g00001 Gabi-Chr2165 28663 31952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2165g00001 10 359 Monolignol Biosynthesis Gene Families AT3G53140 60.734 2.23e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2165g00001 - - ccaj:109819366 532.717