Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2164g00006 ATGAGGCTATTGGATGTTGAAGGGCAGATTGTCCACATTCGCACTGGCAGGACAATGATGAGGTCCACCATCAATTACCTCGTTGCCATAATCAGTGATTTACTGAAGGATGCCGAGAAATGGTTACCTGCAGCTGAACGATTGTTTGGCTATATTGTCATGCAATTACCGTGCGAATCTGGTTCGTCATTGGAGCAGAGGAATGCTGCTCGATCGGGTTTGCGGCTTCGGAAGAAGCACAAGAGGTTGGACGCGATATGCGAGGAGGAATATAATCGAAACCATGGTGAATTCAATGAGGGTGATTTTGTTGAGGATGGTGGTGATGGAGGGGTTCGCCGAAGCTCTCGGGTTCGGCGTGTCCCGGTTCTGCTGGATGCGTCTCCCGCTCCTCCGAAGAAGCGGCAGAGGTTGATCAAGAATGGAGTGCTGAGTGGTGTGAAGGATGCTAAGATTGAAGAGCGGGTGACCAGGAGCTCTGTTGGGGTAGAGATTCCGAAAGCTTGGAGTTCGAGGTTGAGATCAAGGGTTAGAAGTGTAGGTTTTGAGGTGAAGGAAGAGAGGGAATCGCCAGGTGGGAAAAGGAAACTGATTGAGGAAGGTGTTGAAAGGAGAGATGAGGAGGAGGTTGAGGTTAGAGAGGTTGGTAAGAAAGAGGAATTGGAAGATGGGATGCCGAAAATAGTTAAGACGAAGAGGCCCGGGAGGATCAAAGCTACAAAGGGTGAAGAGGGGCATAAAGATAAAGAGAATGAGACTCATGAGGATTTACTTGAGACTAAGAATCAAGAAGTGGAGCTTACATTGAGCAAAGATGAGGACAGTGCTTCAGTTCTAGAGGAAACCCAGTTGTCTGATGGGAATCTGATAGAAATATTGGATGGGAATGCCCCTCCAACAATAGGGAATGGAGAGAGAGATCTATCTAACAATGTGCAAACAGAGGAGTGTAATGACAGCATTGAACTGTCACCGGTGAAAATTGTAGATAAACAGGATGATCAGTTAGAGACTGCGAAGGAAGGAAAAAATGCAAGTGATGAAGCAGAAGTTGCTGGAACTTTGACAGAACACGTAGAAAATGAAGAATCTGCTGATAAGGAGGTTAACATGGATGAAATGACCTTGCAAGATTCTAATATCATAAGGATAAATGATTCCAAACAAGCTTCAAATGACAAGCCTCGCCACCAACGTATTAAAGAGGGTAGGCGGTGTGGTTTGTGTGGTGGAGGGACTGATAGTAAACCTCCAAAAAGATTAGTACAGGATAATGGTGAAAGTGAGAATGAGGCATATAGTGGCTCTTCAGCTTCAGAGGAGCCTAATTATGATATCTGGGATGGCTTCGGTGATGAACCTGGCTGGTTGGGGCGCCTCTTGGGTCCTATTAATGATCGCTATGGTATTGCTGGAATATGGGTTCATCAGCACTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGAGCTGCACTTTGTAGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGAGCTACCATTGGTTGTCGTGTTGATCGTTGTCCAAAAACATATCACTTGCCTTGTGCAAGGGCAAATGGTTGCATCTTTGATCATCGTAAATTTCTTATAGCTTGCACAGATCATCGGCATCTCTTTCAACCTCACGGTAATAAATATTTCGCTCGGATAAAGAAGTTGAAAGCTAGGAAATTGAAGTTGGAGATGAGGAAACTTTCAAATGATGCTTGGAAAAAGGATGTTGAAGCAGAAGAGAGATGGCTGGAAAATTGTGGTGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTGTACATTGGTGGTTCAGATTCGTCCAGTGAAAAATCATTTCAAGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCAGTGTATGAAGGAAGTTGTTATTTTACCTCTATTATATCCGGAGTTCTTTGGTAATTTAGGGCTTACGCCTCCAAGAGGTGTTCTGTTACATGGATATCCTGGAACTGGGAAAACGTTAGTGGTCCGGGCATTGATAGGTGCATGTGCTTGTGGCGATAAACGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGAAAATATGTGGGTGATGCTGAGCGCCAACTAAGACTATTATTTCAGGTTGCTGAGAGATGTCAACCTTCTATTATATTTTTTGATGAGATAGATGGATTGGCACCCGTCCGAACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACATTACTTGCTCTTTTGGATGGTTTGAAATCTAGGGGTTCAGTTGTAGTTATAGGTGCAACAAATCGTCCTGAAGCTGTTGACCCAGCACTTAGGCGCCCGGGAAGATTTGATCGGGAAATTTATTTTCCATTGCCATCGATGAAGGACAGAGCTGCAATTCTTTCTCTTCATACACAGAGGTGGCCAAAACCAATTACTGGATCCTTGCTTGAGTGGATTGCAAGAAAAACTCCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTTTGTACTCAAGCGGCCCTCAATGCTTTGAAGAGGAATTTCCCTTTGCAAGAAGTGCTATCTGCAGCCGAAGAGAAAGATTCTGGTTGTAAGAACCTTCCTCTTCCGTCTTTTGCGGTGGAGGAGAGGGATTGGTTGGAGGCTTTATCATGTTCTCCACCACCATGCTCTCGGAGAGAAGCTGGAAATGCTGCTAATGATATAATATGCTCCCCTCTTCCCATACACCTTATTCCGTGTTTATTGCGGCCATTATGCACTCTTCTCATATCTCTTTTTCTCGATGAACACCTATGGTTGCCGCCTCCTATATCTAGAGCTGTAACAATGATTAAGAATGTGATGATTTCTGCTTTAGACAAAAAGAAAATGCCTCTTGATCACTGGTGGTTGCATGTTGATAATTTTCTTCAAGAAGCAAATATTGCAGCCGAGGTAGAGAGGAAGCTCACTTGTTCTGGCATTTTGTCTGCTGATGATGGTTTTGCTGGCTCTTTGGATTGTGTGGATGATATTGATGATAACAGGGTGAAATTTGAACACTCTATGAAGCTTGGCATGCGCAGTGGTTTGTCATTTGCATTGACAAACAAATCAGGAACACGTATATTGATTGCTGGAAATCCCAGATCTGGCCAGAGATATCTTGCATCTTGCCTTCTTTACTGCTTTACTGGGAATGTTGAAATTCAGAAGATTGATATGGCAACTATTTCGCAAGAAGGACATGGAGATGTAGTTCAAGGGATTGCAAAAATATTAATGAAATGTGCTAGCGTGCAATTATGTGTAGTATTCATGCCAAGAATTGACTTGTGGGCTGTGGAGACACATTTCCAAATGTCTGAAACTACCGATTCCTGCTCAACACTTCATGCATCCTCTGAGATGGAAAAGTCTTGCCAAGCCAGCAGAAGGGTTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTATCCTCATCCTTGATGATTCTGGCTACTTCAGAAGTTCCCTATACTGAACTTCCATGTAAAATAAAGGAATTCTTCAAGACGTACCAGTCAAAATACAGTCAATCAATTCCTTTGGAGCAGACAGTTCCTCAATTCTCTCTGCAGATTGATGGGAAATTTGATCACGAGGTGGTGATCAATCAATCTGCAGTAGAGCTATTGAGAAATGTAGTTGAACAGCAGATTCAATTAATTCATCAGAGATCTCATATTCAAATGGGTGCCCGCAGGGGGGACAGAGCCTATTGTTCAATTGAAGCTTGTAAAGATAGAGAACTTCAGAGAAACAATAATGAATCAGCCAGTGAGAAGAATGGTAAAATGCAACTTCCTGAATCCTTTACAAAAGTTCCAGCACCACCCAACAGTAGGTCACTGAAGGGGAAGTCAACCCTATTGTTGGCAATATCCACGTTTGGTTATCAAATTCTTCGGTACCCACATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAAGATGGTCCTTGTGCTGATGTAAGTGGACCTTGGAAGGGCTGGCCTTTCAATTCCTGTATAATTCGTCCTAGTAATTCACAAGACAAGGGCATGGGTCCTTGTGGCTCTAGTAGCATGAAAAGCAAAGAGAGATCTGGCTTAGTTAGAGGCTTGGTTGCTGTTGGTTTATCAGCATACAGAGGTGCTTACACATCTGTCAGGGAAGTTTCCCTTGCGGTTCGGAATGTTCTTGAGATCTTGGTTGGGCAAGTTAATACAAAAATTCAAGCTGGAAAGGACAGATTTCAATATCTCCGTGTTTTATCACAAGTGGCTTATCTGGAAGATATGGTCAATAACTGGGCTTATGCATTACTGAGTCTAGAGCAGGATTCCCCAGAGTGTATGACGAAGGTTATGCCGGAAAATGTTGGGCCATTAAATGGCCATCTCACAAGTGATGATCACCAAGCTGAAGGTGTAAATTGCCATTTGGTTGTTCCTATGGAAGGTGATGATTTAGAGACGCTGGGGAGAAGTTGTAAGGGAATTCCTGCTGAAACAACTGGATTTATTTTCTTCAATGACAGAAATGATGATTTAAATAATCTTCATCATGATGGTATAAATGCAAGTTCTGAAGGATCTCTTCAAAACCATTCTTTTTCAGATAAGCATATCAACAACTCAGCTGATATAAACCTACCTGTTGATCCATCCTTAAATCAGGAGAATGGGATGCCATCGTTAACTTCTGGAAATTTTACAGTGGTGAGTGGAGAATTCGGGTTTGCGAAAGACTTGAATGAATCCATACTCACTCCCTCTGTTTCCCTCTCTGAAAATGGAGAATGTGGGTTGTCAAAATCTACTTTCACTAACTCTGTTACCCTTTCTGAAAGTGGACTTCATAGTGCCCGTGAACCAGAGTGTGTTGAGATTGGCAACTCCAAGATTGTCTCTAATCCGCCCCTCAGCTTGTCCTCAGAAGAGACTGGTGTTAAATTAAGTGATGTTAACTCTGGAAAAGATGAAAATGCTATAGACATTAATATCCCTTCAAGCAAGGGCAGTGGTCCTGCTGAATCTGGGGTTATTTGTTCATATCAATGTTGCCCTCAATGTCTATACAGTCTCTATAATTTGACAAAGAAATTACTTGTTCATGAGTGGGGGTTGAATAGTAGCCATTGGACTGTAGAAGATCTCCATGATGCTGTAGCATTATTATCTGTGGATCTTATTTCAGCAGTTAGAAAAATTCACCTGGCCAAAGATCTCACTGATTTATCTGATGAAAACTTAAGGCATGAAAAGCATGAAGCATCTCTTGAATGTTCAAACCTGAGAACTTGTAATCCCAGAAACACTGGAGTGCCAGCTGAATGTGTTTCTCACTCGAAAAGCCATCATGCAACTGGAAGCAAAGATATGGCACTGAATGAACCACTGAAGCTTGATTTTAAATATGTTTTCAGAGATGGTGTACTTATTCATATGGACCCAGACAAGGATGTCTCTCTTCACTGTAAATTTGAGACCTTTTGCCTCTGTTCTGTTAGAGAGTTGATAGTAATGATAAAGTGCCCTTTTGATTGA 5643 0.4269 MRLLDVEGQIVHIRTGRTMMRSTINYLVAIISDLLKDAEKWLPAAERLFGYIVMQLPCESGSSLEQRNAARSGLRLRKKHKRLDAICEEEYNRNHGEFNEGDFVEDGGDGGVRRSSRVRRVPVLLDASPAPPKKRQRLIKNGVLSGVKDAKIEERVTRSSVGVEIPKAWSSRLRSRVRSVGFEVKEERESPGGKRKLIEEGVERRDEEEVEVREVGKKEELEDGMPKIVKTKRPGRIKATKGEEGHKDKENETHEDLLETKNQEVELTLSKDEDSASVLEETQLSDGNLIEILDGNAPPTIGNGERDLSNNVQTEECNDSIELSPVKIVDKQDDQLETAKEGKNASDEAEVAGTLTEHVENEESADKEVNMDEMTLQDSNIIRINDSKQASNDKPRHQRIKEGRRCGLCGGGTDSKPPKRLVQDNGESENEAYSGSSASEEPNYDIWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPHGNKYFARIKKLKARKLKLEMRKLSNDAWKKDVEAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSSSEKSFQGWESVAGLKDVIQCMKEVVILPLLYPEFFGNLGLTPPRGVLLHGYPGTGKTLVVRALIGACACGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPVRTRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMKDRAAILSLHTQRWPKPITGSLLEWIARKTPGFAGADLQALCTQAALNALKRNFPLQEVLSAAEEKDSGCKNLPLPSFAVEERDWLEALSCSPPPCSRREAGNAANDIICSPLPIHLIPCLLRPLCTLLISLFLDEHLWLPPPISRAVTMIKNVMISALDKKKMPLDHWWLHVDNFLQEANIAAEVERKLTCSGILSADDGFAGSLDCVDDIDDNRVKFEHSMKLGMRSGLSFALTNKSGTRILIAGNPRSGQRYLASCLLYCFTGNVEIQKIDMATISQEGHGDVVQGIAKILMKCASVQLCVVFMPRIDLWAVETHFQMSETTDSCSTLHASSEMEKSCQASRRVSHAWMSFIEQVESIGVSSSLMILATSEVPYTELPCKIKEFFKTYQSKYSQSIPLEQTVPQFSLQIDGKFDHEVVINQSAVELLRNVVEQQIQLIHQRSHIQMGARRGDRAYCSIEACKDRELQRNNNESASEKNGKMQLPESFTKVPAPPNSRSLKGKSTLLLAISTFGYQILRYPHFAELCWVTSKLKDGPCADVSGPWKGWPFNSCIIRPSNSQDKGMGPCGSSSMKSKERSGLVRGLVAVGLSAYRGAYTSVREVSLAVRNVLEILVGQVNTKIQAGKDRFQYLRVLSQVAYLEDMVNNWAYALLSLEQDSPECMTKVMPENVGPLNGHLTSDDHQAEGVNCHLVVPMEGDDLETLGRSCKGIPAETTGFIFFNDRNDDLNNLHHDGINASSEGSLQNHSFSDKHINNSADINLPVDPSLNQENGMPSLTSGNFTVVSGEFGFAKDLNESILTPSVSLSENGECGLSKSTFTNSVTLSESGLHSAREPECVEIGNSKIVSNPPLSLSSEETGVKLSDVNSGKDENAIDINIPSSKGSGPAESGVICSYQCCPQCLYSLYNLTKKLLVHEWGLNSSHWTVEDLHDAVALLSVDLISAVRKIHLAKDLTDLSDENLRHEKHEASLECSNLRTCNPRNTGVPAECVSHSKSHHATGSKDMALNEPLKLDFKYVFRDGVLIHMDPDKDVSLHCKFETFCLCSVRELIVMIKCPFD 1880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2164g00006 1880 MobiDBLite consensus disorder prediction 389 404 - -
Gabi2164g00006 1880 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 401 557 - -
Gabi2164g00006 1880 Gene3D - 817 909 - -
Gabi2164g00006 1880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 643 874 IPR027417 -
Gabi2164g00006 1880 MobiDBLite consensus disorder prediction 1289 1318 - -
Gabi2164g00006 1880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 401 557 IPR013083 -
Gabi2164g00006 1880 PANTHER AAA DOMAIN-CONTAINING 72 1780 IPR045199 -
Gabi2164g00006 1880 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 817 909 - -
Gabi2164g00006 1880 MobiDBLite consensus disorder prediction 233 254 - -
Gabi2164g00006 1880 ProSiteProfiles Extended PHD (ePHD) domain profile. 435 555 IPR034732 -
Gabi2164g00006 1880 SMART AAA_5 677 818 IPR003593 GO:0016887
Gabi2164g00006 1880 Pfam AAA+ lid domain 842 874 IPR041569 -
Gabi2164g00006 1880 MobiDBLite consensus disorder prediction 386 440 - -
Gabi2164g00006 1880 ProSitePatterns AAA-protein family signature. 786 804 IPR003960 GO:0005524|GO:0016887
Gabi2164g00006 1880 Pfam PHD-like zinc-binding domain 476 555 - -
Gabi2164g00006 1880 FunFam ATPase family, AAA domain-containing 2 640 823 - -
Gabi2164g00006 1880 Gene3D - 642 917 IPR027417 -
Gabi2164g00006 1880 Pfam ATPase family associated with various cellular activities (AAA) 681 816 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2164g00006 Gabi-Chr2164 242827 265213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2164g00006 673 901 Calmodulin-binding Proteins AT3G56690 37.555 3.26e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2164g00006 - - lja:Lj3g3v0428950.2 2662.87