Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2161g00008 ATGGAAGGAGCCTCTTCTTCCTCTCCTTCTTCTGGAGCATGTACCTACCATGTGTTCTTGAGTTTTAGGGGAGAAGACACACGTAAAGGGTTCACTGACCATCTCTGTGCTTCACTTGAAAGAAAAGGGATCACAACTTTCAGGGATGACAAAGACCTTGAGAGAGGACAAGTCATTTCACAAGAGCTCCTCAAAGCAATAGAAGAATCCATGTTTGCAATCACCATTCTTTCACCAAACTATGCTTCCTCAACTTGGTGTTTGGATGAGCTCCAAAAGATTGTTGAGTGTAACAACAACAAAAACCTCAGGCTAGCAATCATGCCAGTCTTCTATGGCGTGGACCCTTCTGATGTGAGGCACCAAAGAGGAAGCTATGAGGAAGCTTTCAAAAAACATGAAGAGAATTTCCAACAAGACAGAGAGAAGGTTCAAAGATGGAGAGATGCGTTAAGACATGCTGCGAGTCATTCTGGTTGGGACTCCAAGGATCGGCATGAGGCAGCACTTGTTGAAAGCATTACTGAGCTTGTACATAAAAAGCTGATTCCAAAATTGCCATCTTGTACGGAGAACCTTGTTGGGATTGCTTCAAGGGTGGAGGAAGTGAATAGGCTCATAGGAATGGGGTTGAGTGATGTTCGCTTTATAGGCATATGGGGCATGGGTGGCATAGGAAAGACAACTATTGCTAGAGCAGTCTATGAAGCATTAGCAATCAATGGCAAGTTTGAAGCTACTTGCTTTCTTGGTAATGTTAGAGAGGTATCTGAGACAAATGGTTTAGTTCACATACAAAGAGAACTTCTTTGTCGTCTAAATATAAGTAGCAGTTCTTGTTATGATTTATGTGATGGGAAAAAGACAATACAAAACTCTTTATGTAGAAAAAAGGTTCTGCTTGTTCTTGATGATGTAAATGAAGTAAACCAATTGGAGAATTTGGCTGGGAAGCAAGATTGGTTTGGTCAGGGAAGCCGAGTAATAATCACAACTAGAGATATGCACTTGCTAGTGACACATGGAGTGCATAAAACTTATAAGGTTGGAAGGTTGTGCCAAAATGAAGCCCTTCATCTATTTTGTTTGAAGGCCTTTAAACGTGATCAACCACAAGAAGGGTATTTGGATTTGTCCAATGAAGTGGTGGATTATACTGGTGATCTTCCATTGGCACTTGAGGTGTTGGGTTCCTATCTCTATGGAAGAACTGTTGATGTTTGGCATAGTGCTGTGAAAAAATTAAGAAGCGTTCCACACCCCAAAATTCAAGATACGCTGAAAATAAGTTATGATGGTTTAGATTCCATGGAGAAGAATATTTTTCTTGATATAGCCTGTTTCTTCAAGGGAATGAAGAGAGATGAATTAATAGATATATTGGAAAATTGTGATTATTGTCCTCAAATTGGAATTGAAATTTTGATTGAAAGATCTTTGGTAAGTCTAGATCCGGGGAATAATGAATTGAGGATGCATGATTTGCTCCGAGAAATGGGCAGGAATATTGTATTTCAAGAATCTCCAAATGATCCTGGCAGACGTAGCAGGTTGTGGTTTCAAGAGGACATTGATCATGTGTTAGCAAAAAATAAGGGAACTGAAGCAATTCATGGTATAGTTCTGAACTTACCTCAACCATATGAAGCACGCTGGAATACTGAAGCCTTCTCAAAGACAAGTCAGCTAAAATTTCTCAGCTTATGTGAGATGCAACTTCCCCTTGGACTAAGCTTCCTTCCTAGTTCAGTAAAAGTTCTTCATTGGAGAGGATGCCCTTTGAAAACTCTGCCACTAAGAAATCAATTGGATGAAGTTGTTGACATTAAATTGTCTCATAGTGAAATTGAACAACTTTGGCAAGGAATTAAGTTTATGGAAAAGCTGAAGTACCTGAATTTGACTTTTTCCAAGAACCTAAAGCGATTGCCTGATTTTTCTGGGGTCCCAAATCTTGAAACACTGGTTCTTAAAGGCTGTGAAAGCCTAACTGAAGTTCATCCATCCCTTGTACAGCACAACAAAGTTGTTCTAATGAATTTTGAAGATTGCAAGAGTCTTAGAGCTCTTCCAGGTAAATTGGAGATGAGTTCCCTGAAGGAGTTAATTCTTTCTGGTTGTTCTGAATTTAAATTTCTCCCAGAGTTTGGGGAAAGGATGGAACATCTATCAATGCTTGCTTTAGAGGGAACAGCTATAAAAAAACTACCCTCATCACTAGGATGCCTAGTTGGGCTTGCTGTTTTGAACTTAAAGAATTGCAAAAGTCTTGTTTGCCTTCCAGATTCCATTCATGGATTGATTTCCCTCAGAATTCTAAATATTTCTGGGTGCTCAAAGCTCAGTAGATTGCCAGAGGGTTTAAAGGAAATCAAGTGTTTGGAGGAACTTGATGCCAGTGAAAGTGGTATTGAAGAACTACCTTCGTTGGTCTTTTATTTAGAAAATCTTAAAGTGTTATCATTTGCTGGGTGCAAAGGGTCAGTGTCTAATTCAGTGAATTTGAGTCACTTCAATTGGCTGTTTAGAAGTAAACCAGCTTTCACTGGATTCAGATTGCCTCCTTCTGTCTCAAGTCTACCATCTTTGAGATATATAAATTTAAGTTACTGCAATCTCTCCGAAGAATCAATCCCACATGATTTTTGCCACTTATCATCATTGTTGTCTTTGGATCTAACTGGTAACAACTTTGTTAGCATACCAAGCAGCATTTCTAAACTTCCAAAGCTGAAATTTCTTGGGCTGAATAGATGCCAAAAGCTTCAATTGTTGCCAGACCTTCCGTCAAGCATAATAGAGTTGGACGCAAGCAATTGTAATTCACTTGAAACTTCCAAATTCAATCCAACAAAGCCATGTAGTCTATTTGCATCACCTGTAAAATTGTGCTTACCTCGAGAATTGAATAGCTTTATTGAGGAACTTTGTCTTCCTAGTGCAAGATTTGACATGCTTTATACAGGGAGTGAAATTCCATCTTGGTTTGTTCCTCAAAAATGTGTTTCTTGGGCAAAAATACAAGTCCCTAATAATTGCCCTCTAGATGAATGGGTGGGGTTTGTTTTGTGTTTCCTATTAGTAAGTTATGCGGATCCACCTGAGTCATGCTGTCATGAAATCGATTGTTATTTGTTTGGACCTAATGGTAAGATGTTCGTCGCCACAAGGACTTTACCTCCTATGGAGCAAGGTTATCCTCACCTTTATATTCTTTATTTGTCCATTGATCGATTTCGTGAGAGAATTCTCGAAGATGATGATTACTGGAGTACAATTGAATTTGCTTTGAAAAGTTATTGTTGTCAATCATTGCAAATAGTGAGGTGTGGGAGCCGTTTGGTATGTAAGCAAGATGTTGAAAATTGGAACAAAGCAATGAGTCAATGCAATAGTAGTTGA 3402 0.3901 MEGASSSSPSSGACTYHVFLSFRGEDTRKGFTDHLCASLERKGITTFRDDKDLERGQVISQELLKAIEESMFAITILSPNYASSTWCLDELQKIVECNNNKNLRLAIMPVFYGVDPSDVRHQRGSYEEAFKKHEENFQQDREKVQRWRDALRHAASHSGWDSKDRHEAALVESITELVHKKLIPKLPSCTENLVGIASRVEEVNRLIGMGLSDVRFIGIWGMGGIGKTTIARAVYEALAINGKFEATCFLGNVREVSETNGLVHIQRELLCRLNISSSSCYDLCDGKKTIQNSLCRKKVLLVLDDVNEVNQLENLAGKQDWFGQGSRVIITTRDMHLLVTHGVHKTYKVGRLCQNEALHLFCLKAFKRDQPQEGYLDLSNEVVDYTGDLPLALEVLGSYLYGRTVDVWHSAVKKLRSVPHPKIQDTLKISYDGLDSMEKNIFLDIACFFKGMKRDELIDILENCDYCPQIGIEILIERSLVSLDPGNNELRMHDLLREMGRNIVFQESPNDPGRRSRLWFQEDIDHVLAKNKGTEAIHGIVLNLPQPYEARWNTEAFSKTSQLKFLSLCEMQLPLGLSFLPSSVKVLHWRGCPLKTLPLRNQLDEVVDIKLSHSEIEQLWQGIKFMEKLKYLNLTFSKNLKRLPDFSGVPNLETLVLKGCESLTEVHPSLVQHNKVVLMNFEDCKSLRALPGKLEMSSLKELILSGCSEFKFLPEFGERMEHLSMLALEGTAIKKLPSSLGCLVGLAVLNLKNCKSLVCLPDSIHGLISLRILNISGCSKLSRLPEGLKEIKCLEELDASESGIEELPSLVFYLENLKVLSFAGCKGSVSNSVNLSHFNWLFRSKPAFTGFRLPPSVSSLPSLRYINLSYCNLSEESIPHDFCHLSSLLSLDLTGNNFVSIPSSISKLPKLKFLGLNRCQKLQLLPDLPSSIIELDASNCNSLETSKFNPTKPCSLFASPVKLCLPRELNSFIEELCLPSARFDMLYTGSEIPSWFVPQKCVSWAKIQVPNNCPLDEWVGFVLCFLLVSYADPPESCCHEIDCYLFGPNGKMFVATRTLPPMEQGYPHLYILYLSIDRFRERILEDDDYWSTIEFALKSYCCQSLQIVRCGSRLVCKQDVENWNKAMSQCNSS 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2161g00008 1133 SUPERFAMILY L domain-like 746 976 - -
Gabi2161g00008 1133 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Gabi2161g00008 1133 Gene3D - 352 435 IPR042197 -
Gabi2161g00008 1133 SMART till_3 15 157 IPR000157 GO:0007165
Gabi2161g00008 1133 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Gabi2161g00008 1133 Gene3D - 182 346 IPR027417 -
Gabi2161g00008 1133 PRINTS Disease resistance protein signature 386 400 - -
Gabi2161g00008 1133 PRINTS Disease resistance protein signature 216 231 - -
Gabi2161g00008 1133 PRINTS Disease resistance protein signature 293 307 - -
Gabi2161g00008 1133 PRINTS Disease resistance protein signature 694 710 - -
Gabi2161g00008 1133 Gene3D Ribonuclease Inhibitor 551 715 IPR032675 -
Gabi2161g00008 1133 Gene3D Ribonuclease Inhibitor 716 972 IPR032675 -
Gabi2161g00008 1133 Pfam NB-ARC domain 204 435 IPR002182 GO:0043531
Gabi2161g00008 1133 Pfam C-JID domain 988 1121 IPR045344 -
Gabi2161g00008 1133 SMART LRR_typ_2 860 884 IPR003591 -
Gabi2161g00008 1133 SMART LRR_typ_2 720 743 IPR003591 -
Gabi2161g00008 1133 SMART LRR_typ_2 791 814 IPR003591 -
Gabi2161g00008 1133 SMART LRR_typ_2 885 908 IPR003591 -
Gabi2161g00008 1133 SUPERFAMILY L domain-like 506 826 - -
Gabi2161g00008 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 782 IPR044974 GO:0006952
Gabi2161g00008 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 445 IPR027417 -
Gabi2161g00008 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 160 IPR035897 -
Gabi2161g00008 1133 Pfam TIR domain 16 195 IPR000157 GO:0007165
Gabi2161g00008 1133 Gene3D - 10 181 IPR035897 -
Gabi2161g00008 1133 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2161g00008 Gabi-Chr2161 204629 210051 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2161g00008 746 914 WRKY Transcription Factor Family AT4G12020 35.503 1.20e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2161g00008 - - gmx:100815486 1534.62