Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2161g00003 ATGGGTTACTTTGGTCAAAGTCCCCAATATGTAGAGATTGAAAAAATTGTTAAAGAGATACTAAGTATATTGGATCAGAAAATTTCAAGTCTTCCAAATGACCTAGTTGGGATAGAATCTCCTATCGAAGAGTTAGAAAAGCTTTTACTTTTGAGGTCGGTTGACGATGTTCGGGTTGTAGGAATTTGTGGGATGGGAGGAATAGGAAAGACAACTCTTGCTTCAGTTTTGTGGGATAAAATCTCTGATCAATATGATGCTCGGTGTTTCATTGCTGATGTCAACAAGTCTGATCCATTTGATACACAAAAGCAAATTTTAGAACAAGCTCTTAATGAAGTAAACCTTAATATTTTCAATCCTTCTATGGCAGCTAATCTGATACGAAGTAGGCTGGGTCATGCAAGGACCCTTATAGTTCTTGATAATATTGGTCAAATTGAACAACTGGAGAAATTAGCTGTGAATCGTGAATGGTTAGGTGCGGGAAGTAGAATCATCATAACTTCTAGAGACTTGCATATCTTAAAAGCGTACGGAGTGGACCATGTTTACACAGTGGAACTCTTGAATGCTGATAATGCTCTTCAATTATTTTGCAAAAAGGCTTTCAAATGTGATATTATTAGGACAGGTTATGAAGTGTTGACATATGATGTACTAAAATATGCTAATGGCCTTCCACTAGCGGTTAAAGTATTGGGCTCATTTTTGTTTGGTCGAGATGTAGATGAGTGGAGAAGTGCATTGACTAGATTGAAAGAAAATCCAAATAAAGATATTATGAATGTGCTTCGAATAAGTTATGATGGACTAGAAGAAATTGAAAAAGAAATATTTCTAGATATTGCTTGTTTCTTCAAACAGCAGGAGGTGTATGAAGTTAAGAGAATCCTTAATTGTTGTGGATTTGAACCTGATATTGGGATAAGAGTTCTCTTTGATAAATCACTCATAACCATTTCGACTTATTATGCCGACTTTCCTCGTATTGAAATACATGATTTGTTGCAAGAGCTTGGTAGAAAAATAGTTCGAGGAGATTCACCCAGAGAGCCAGGAAAGTGGAGCAGGCTTTGGCTCTACAAAGATTTTTGCAAGGTTATGTTGGAGGAGAATACGGAAAATAACGTTGAAGCCATATTTGTGCGTGGTTACCCAGAAGCTAGTGCATTGATGGCTGAAGCATTGTCAAAAATGAGTCACCTTAGATCGCTCATACTCTATGGTGTAAATTTTTCTGGAAGCCTCAATTACCTTTTTGATAAGTTGCGATATGTTGAGTGGCGTAAATATCCTTTCATGTATTTGCCGTCAAGTTTTCAGCCGGATGAGCTTGTTGGATTGTGCTTGATGCATAGCAGCATCAAACAACTATGGGACGGCAAGAAGCATATGCCCAGTTTGATAAGGCTGGATCTTAGCCACTCCAAAAATCTTACCAAGTTGCCAGATTTTGGAGAGCTCCCAAATCTTGAGCAGCTGACTCTTGAAGGATGTACAGAACTTGTGGAGATCGATCCATCCATTGGTCTTCTAAGAAAGCTTGCTCGCTTGATTTTGAAAAACTGCAAAAATCTCTTAAGTATACCCGACAACATAGTGGGTATCACTTCTCTTACATATCTAAATCTCCAAGGCTGTTCAAAACTGTTTAATAACCAGCTTGATATAAGTGCATCTACTCTGCACTCCCAATCAACGTCTTCCACCTTCAAAAGGTTTTTGATGCCTTCCTTGCCTAGCCTCTCTTGTTTGAGTTTTCTTAGTCTATGTTTTTGCAATCTACTGCAAATTCCTGATGCAATTGGAAGTTTACATAGCTTAGTAGCCCTTATGTTAACAGGAAACAATTTTGATAGACTGACTTGTAGCCTGAAAGAGCTTTCCAAGCTTAGACATTTAAACCTGTCACATTGCAAGCAGTTGGAATCTTTGCCTGAGTTCCCTTCACGTACGTATGTTCCAGTAAAATCTAATTTTAGGCAACTAATGTTATATATTTTCAACTGCCCAAATATGGGTGAGATGGAACGCTGCAGTTCCATGAGTTTTTCATGGATGATACAAGTCATTCAGGCGAGCCTAGAACCCTCTGTAAGCACTGGTTATATTGATATTGTTATTCCAGGAAGTGAAATACCAAGGTGGTTCCACAATCAGTGTGTGGGTAGCTCAATAAGCATAGAACCATCTCCCATTATGCATGACAATAATTGTATTGGTATTGCTTGCTGTGCGGTATTTGTGGCACATGGGTTAATGGTCGTCAATGTGTTGCCTCTCGATGGAGAACTGGTCACGGTCGAATCAGATCATATGTGGCTATTCTATTTCAATCGCCAAAAAGCAATTGATTTTATGGGTCGTGCAGCTCGCAAAAAAAGGGAGACAAATGATCTTGAAGATATCAAGATGGCAGTTTTGTTTAAAGACGGCCAAGGTTTGCAGTTTGAGGTGAAGAATTGTGGGTATCATTGGTTATTTGAGAAGGATCTTGAACTATTTAAGAATATGCATGCCGGTAATTCGTCAGCTCAAAAGCGCAAGTTTTTAGCAATTGATGATGAGCCACAGTCATAA 2583 0.3856 MGYFGQSPQYVEIEKIVKEILSILDQKISSLPNDLVGIESPIEELEKLLLLRSVDDVRVVGICGMGGIGKTTLASVLWDKISDQYDARCFIADVNKSDPFDTQKQILEQALNEVNLNIFNPSMAANLIRSRLGHARTLIVLDNIGQIEQLEKLAVNREWLGAGSRIIITSRDLHILKAYGVDHVYTVELLNADNALQLFCKKAFKCDIIRTGYEVLTYDVLKYANGLPLAVKVLGSFLFGRDVDEWRSALTRLKENPNKDIMNVLRISYDGLEEIEKEIFLDIACFFKQQEVYEVKRILNCCGFEPDIGIRVLFDKSLITISTYYADFPRIEIHDLLQELGRKIVRGDSPREPGKWSRLWLYKDFCKVMLEENTENNVEAIFVRGYPEASALMAEALSKMSHLRSLILYGVNFSGSLNYLFDKLRYVEWRKYPFMYLPSSFQPDELVGLCLMHSSIKQLWDGKKHMPSLIRLDLSHSKNLTKLPDFGELPNLEQLTLEGCTELVEIDPSIGLLRKLARLILKNCKNLLSIPDNIVGITSLTYLNLQGCSKLFNNQLDISASTLHSQSTSSTFKRFLMPSLPSLSCLSFLSLCFCNLLQIPDAIGSLHSLVALMLTGNNFDRLTCSLKELSKLRHLNLSHCKQLESLPEFPSRTYVPVKSNFRQLMLYIFNCPNMGEMERCSSMSFSWMIQVIQASLEPSVSTGYIDIVIPGSEIPRWFHNQCVGSSISIEPSPIMHDNNCIGIACCAVFVAHGLMVVNVLPLDGELVTVESDHMWLFYFNRQKAIDFMGRAARKKRETNDLEDIKMAVLFKDGQGLQFEVKNCGYHWLFEKDLELFKNMHAGNSSAQKRKFLAIDDEPQS 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2161g00003 860 Gene3D Ribonuclease Inhibitor 388 554 IPR032675 -
Gabi2161g00003 860 Gene3D Ribonuclease Inhibitor 555 692 IPR032675 -
Gabi2161g00003 860 PRINTS Disease resistance protein signature 131 145 - -
Gabi2161g00003 860 PRINTS Disease resistance protein signature 59 74 - -
Gabi2161g00003 860 PRINTS Disease resistance protein signature 224 238 - -
Gabi2161g00003 860 PRINTS Disease resistance protein signature 627 643 - -
Gabi2161g00003 860 Pfam NB-ARC domain 41 266 IPR002182 GO:0043531
Gabi2161g00003 860 SUPERFAMILY L domain-like 351 666 - -
Gabi2161g00003 860 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 551 IPR044974 GO:0006952
Gabi2161g00003 860 Pfam C-JID domain 709 834 IPR045344 -
Gabi2161g00003 860 Gene3D - 14 183 IPR027417 -
Gabi2161g00003 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 283 IPR027417 -
Gabi2161g00003 860 Gene3D - 189 273 IPR042197 -
Gabi2161g00003 860 SUPERFAMILY "Winged helix" DNA-binding domain 260 369 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2161g00003 Gabi-Chr2161 52402 55390 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2161g00003 36 650 WRKY Transcription Factor Family AT5G45050 32.767 8.97e-83 287