Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2161g00002 ATGGTCACCAAAAACCAGAACCGGCCTCCATTATCACTCACATCCCCACCTCCAACTCCTTCAAAGAACTTTGTGGCTAATGTGCTCCTCCTAGATAAAGGGCTACAATTTGGAGTAGAAAAAATGGTGGGGACTCCGATTAATGCAAGGGAAAGGCAAGCTTTTACAGTTGTAAATGGTGGACACGATCTTGGACCGAGTAGTGCTCCTCCAAGCATTGCTGGATCGGATTATGGTGTAATAGAGTTCACAAGAGAGGATGTGGAAGCATTGCTAAATGAGAAGGCCAAAAGGAAGGACAGATTTAATTACAAGGAGAGATGTGAAAATATGGTGGATTATGTAAAAAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACCTTGAGATGAGCTATTCACTAGAGCAGGAAAAGTTAAAGAATTCATTGGATATGACCCAGCAAAAATGCATAGAAATTGAGTTGCTACTTAAAATCAAGGAAGAAGAATTGAGTTCAATTATTGCGGAAATGAGGAGGAATTGCACTTCTTTACAAGAGAAATTGATGAAGGAAGAATCAGAAAAGTCGGCTGCAGTGGAATCTCTTGTGAAAGAGAGAGAGGCTAGGCTTCACATTGAGAGGTCACAGACTGCTCTGTCAGAGGATCTTGGGAGAGCTCAAAGAGAGATCCAAAGTGCAAATCAGAAGATATCGTCACTCAATGACATGTATAAGCGGTTACAAGATTACATAACAAGCTTACAACAGTACAATGGAAAACTTCATACAGAGCTTTCATCAGTTGAAGATGAACTTAAACGTGTAGAGAAAGAGAAGGCTACTGCAGTGGAGAACCTCACCATGTTAAGGGGTCAACTTACTTTGTCCATTTCTTCTCAAGAAGAGGCAGTAAAACAGAAGGATTCTTTGGCTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGAAGATCGAGACCGCCATTCATCTCAAGTGCAAAATTTAACTTGTGAATTAGTGAAATTTAAAGAATCTACAGAAAACTCCTGCACTGAATTGGACAACTTAACATTAAAAGCAAGTGAATTGGAGGCAAAATGTTCTTTGAAAGATAATCAAATAAAGGCATTGCAAGAGCAGCTAGGATCTGCGGAGAAGAAACTGCAGGTGTCTGATATATCTGCATTCGAGACAAGGACAGAATTTGTAGGGCAACAGAAATTTGTAGATGAGTTACAAAGACGCTTGGCAGATGCTGAAAATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAGTTACATAATACCATTTTGGAATTAAAAGGGAACATCCGTGTATTCTGTCGAGTGAGGCCTTTGTTGCCTGATGAAAGTTGTAGCACAGAAGGCAAGATTTTCAGTTATCCAACATCGATGGAAGCAACTGGACGAGGCATTGACCTAGCCCAAAATGGCCAAAAACACTCTTTCACATTTGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGCGCTCTTGATGGTTATAAGGTCTGCATCTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGCAGGCTTGGACATCCAGAGGAAAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACAAAGCAGTCTCAACAACCTCAAGGCTGGAAATATGAGATACAGGTGTCAATGTTGGAAATATACAATGAAACCATTCGTGATCTGCTTTCTACAAACAAACCATTATCAGATGCAACACGCCTGGAAAATGGTACTCCTGGAAAACAGTATACAATCAAACATGATGCAAGTGGAAATACACAAGTTTCTGATCTTACAATAGTGGATGTTCAGAGTGCTAGAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTTACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTTATTGATCTTGCTGGTAGTGAGCGACTTTCAAAGAGTGGCTCAACTGGGGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTGTCATCATTAAGTGATGTTATATTTGCCTTGGCCAAGAAGGAGGATCATGTTCCATTCAGAAACACAAAGCTTACATATCTGCTTCAGCCTTGTCTGAGTGGGGATTCCAAGACATTAATGTTTGTGAACATGTCACCTGATCCTTCTTCAGTTGGTGAGTCACTATGCTCACTCAGGTTTGCATCCAGAGTGAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGACGATCTTCAGATTCTCGCTTGAGCTATTTCTAA 2406 0.4036 MVTKNQNRPPLSLTSPPPTPSKNFVANVLLLDKGLQFGVEKMVGTPINARERQAFTVVNGGHDLGPSSAPPSIAGSDYGVIEFTREDVEALLNEKAKRKDRFNYKERCENMVDYVKRLKVCIRWFQDLEMSYSLEQEKLKNSLDMTQQKCIEIELLLKIKEEELSSIIAEMRRNCTSLQEKLMKEESEKSAAVESLVKEREARLHIERSQTALSEDLGRAQREIQSANQKISSLNDMYKRLQDYITSLQQYNGKLHTELSSVEDELKRVEKEKATAVENLTMLRGQLTLSISSQEEAVKQKDSLASEVASLRGELQQVREDRDRHSSQVQNLTCELVKFKESTENSCTELDNLTLKASELEAKCSLKDNQIKALQEQLGSAEKKLQVSDISAFETRTEFVGQQKFVDELQRRLADAENKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTEGKIFSYPTSMEATGRGIDLAQNGQKHSFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRLGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEIQVSMLEIYNETIRDLLSTNKPLSDATRLENGTPGKQYTIKHDASGNTQVSDLTIVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNTKLTYLLQPCLSGDSKTLMFVNMSPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRSSDSRLSYF 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2161g00002 801 Coils Coil 81 101 - -
Gabi2161g00002 801 Coils Coil 301 335 - -
Gabi2161g00002 801 Coils Coil 161 188 - -
Gabi2161g00002 801 Gene3D Kinesin motor domain 383 782 IPR036961 -
Gabi2161g00002 801 PANTHER KINESIN-LIKE PROTEIN KLP-3 294 788 IPR027640 GO:0003777|GO:0007018
Gabi2161g00002 801 ProSiteProfiles Kinesin motor domain profile. 440 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2161g00002 801 Coils Coil 406 433 - -
Gabi2161g00002 801 Pfam Kinesin motor domain 446 778 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2161g00002 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 778 IPR027417 -
Gabi2161g00002 801 Coils Coil 350 384 - -
Gabi2161g00002 801 PRINTS Kinesin heavy chain signature 681 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2161g00002 801 PRINTS Kinesin heavy chain signature 730 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2161g00002 801 PRINTS Kinesin heavy chain signature 650 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2161g00002 801 PRINTS Kinesin heavy chain signature 516 537 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2161g00002 801 Coils Coil 210 244 - -
Gabi2161g00002 801 ProSitePatterns Kinesin motor domain signature. 680 691 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi2161g00002 801 CDD KISc_C_terminal 438 782 - -
Gabi2161g00002 801 SMART kinesin_4 438 788 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2161g00002 801 FunFam Kinesin-like protein 386 782 - -
Gabi2161g00002 801 Gene3D - 149 330 - -
Gabi2161g00002 801 Coils Coil 252 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2161g00002 Gabi-Chr2161 8089 14902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2161g00002 109 777 Calmodulin-binding Proteins AT5G65930 32.148 4.67e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2161g00002 K10405 - gmx:100784221 1335.47