Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2160g00015 ATGGGGAACATTTATTTGGCTCATTTTGTGGTGTTGTTTTGGTTGGGGATGCTTGTATCTTGCTTGTGTCAAGATGTTTCAGATGATGCTACTACGGCTGTGTATATCGTTGCTCTGAGACAAGCTCCTGTTTCTCATTACTATGGTGAGTTGAGAAGAGTACCCAATGGCTTCAAACATGATGATTCTGGGAGAACTCAATTTCAAAAACCAAGATATGATAACATCACGAAGACGGACAAGAGATATGGCTCTTACATTTCCCGAGTTCATGATTCTTTGTTGAAGAAAGTATTAAAAGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTGATAAATGGATTTTCTGTGCTGGTTACCCAACAGCAGGCAGAGAAACTATCAAGGAGAAGTGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGAACTGCAACTACCCATACTCCACAATTTTTGGGTCTGCCACAGGGAGCATGGTTTCAAGATGGTGGGTTTGAAACTGCTGGGCAAGGAATTGTTATTGGGTTTATTGACACTGGCATAGATCCAGCACACCCTAGTTTTAGTGATAATAAATCTGAACATCCATATCCTGTTCCTGCTCATTTTTCTGGTATATGTGAGGTTACTCGGGATTTTCCGTCGGGTTCTTGCAATAGGAAGCTTGTTGGCGCCCGTCATTTTGCAGCATCTGCTATAACCAGAGGAATATTTAATTCAACTCAGGACTATGCTTCTCCCTTTGATGGCGATGGCCATGGCACGCATACCGCATCTACTGCAGCAGGAAACCATGGGATTTCAGTGATTGTTGCTGGGCATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGTTCACACATCGCTGTTTACAAAGCATTATACAAGGGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGATCAGGCAGCTCAGGATGGGGTTGACATAATAAACTTGTCAATTACTCCTAATAGACGTCCTCTTGGGGTTGCAACTTTCATCAACCCAATCGACATGGCATTGCTGTCAGCTGTAAAGGCTGGTATTTTTGTAGTGCAAGCTGCAGGAAATACTGGACCATCACCAATGAGCACGTCCTCTTTCAGTCCATGGATCCTTACTGTTGGTGCCGCCTCTCATGACCGGGTTTATAGCAACTCCATATTTCTTGGAAATAATGTAACCTTACCTGGAGTTGGACTTGCACCTGGCACATATGAGAACAAACTTTATAAACTGATTCATGCACACCATGCTTTGAACAATGACACAATGGTTGCTGATGATATGTATGTTGGTGAGTGCCAAGATGCAAGCAAGTTCAATCAGGATTTGATCCAGGGGAACCTCTTAATATGCAGCTATTCAATCAGGTTTGTGTTGGGGCTCTCTACTGTCAAACTGGCCTCAGAAACAGCCAAGAACCTTAGTGCAGCTGGTGTTGTCTTCTATATGGATCCTTTTGTGATTGGTTTTCAGCTTAATCCAGTTCCAATGAAAGAGCCTGGCATAATAATTGCATCCACAAATGATTCCAAGATTTTAATGCAATACTACAATTCTTCATTGGAAATTGATGCTGTTTCAAAGAAAATTGTTAAATTTGGGGCTGTTGCCAGTATCTGTGGTGGAATAAAAGCAAATTATGGTAATGCTGCTCCGAAGGTTATGTATTACTCTGCCAGAGGTCCAGATCCAGAGGACAGTCTTCCTCACGAAGCTGACATTTTGAAACCTAACTTGATAGCTCCTGGAAGTTCTATATGGGCTGCTTGGAGTTCTCTTGGCACCAGTTCGGTTGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCACATATTGCTGGCCTTGCTGCACTAATTAGGCAAAAGTTCCCCAATTTCAGTCCTGCAGCCATTGGATCTGCACTTTCTACTACTGCTTCTCTGTATGACAGGAATGGTGGGCCAATAATGGCTCAGCGATCATATGCCTCTCCTGATGAAAACCAATCTCCAGCAACTACTTTTGACATGGGAAGTGGTTTTGTGAATGCAACTGCAGCATTGAATCCGGGTTTGATTTTTGATTCCAGTTATGAGGATTACATGGCATTTCTATGTGGTATCAATGGTTCAGCTCCTGTGGTGCTAAACTACACTGGTCAAAGTTGTTGGCTTTATAATAAAACTGTATATGGTCCTGACCTCAACTTGCCCTCAATCACCATATCAAAGCTAAACCAATCTAGAGTAGTGCAGAGGACAATCCAAAACATAGCCGAAAATGAAACATACAGTGTTGGTTGGAGTGCTCCTTATGGGGTTTCAGTGAAAGTATCTCCAACTCACTTCTCTATTGCCAATGGTGAGAGGCAGCTCTTGTCTGTACTCTTGAATGCAACCGTTAACAGCTCTGTTGCTAGCTTTGGGAGGATTGGGCTGTTTGGTAATCAAGGTCATGTTGTCAACATTCCTCTTTCAGTTATGGTTAAAATCTCCTATAACTTAACTACCAGCTAA 2538 0.4255 MGNIYLAHFVVLFWLGMLVSCLCQDVSDDATTAVYIVALRQAPVSHYYGELRRVPNGFKHDDSGRTQFQKPRYDNITKTDKRYGSYISRVHDSLLKKVLKGEKYLKLYSYHYLINGFSVLVTQQQAEKLSRRSEVSNVVLDFSVRTATTHTPQFLGLPQGAWFQDGGFETAGQGIVIGFIDTGIDPAHPSFSDNKSEHPYPVPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTASTAAGNHGISVIVAGHHFGNASGMAPRSHIAVYKALYKGFGGFAADVVAAIDQAAQDGVDIINLSITPNRRPLGVATFINPIDMALLSAVKAGIFVVQAAGNTGPSPMSTSSFSPWILTVGAASHDRVYSNSIFLGNNVTLPGVGLAPGTYENKLYKLIHAHHALNNDTMVADDMYVGECQDASKFNQDLIQGNLLICSYSIRFVLGLSTVKLASETAKNLSAAGVVFYMDPFVIGFQLNPVPMKEPGIIIASTNDSKILMQYYNSSLEIDAVSKKIVKFGAVASICGGIKANYGNAAPKVMYYSARGPDPEDSLPHEADILKPNLIAPGSSIWAAWSSLGTSSVEFLGENFAMMSGTSMAAPHIAGLAALIRQKFPNFSPAAIGSALSTTASLYDRNGGPIMAQRSYASPDENQSPATTFDMGSGFVNATAALNPGLIFDSSYEDYMAFLCGINGSAPVVLNYTGQSCWLYNKTVYGPDLNLPSITISKLNQSRVVQRTIQNIAENETYSVGWSAPYGVSVKVSPTHFSIANGERQLLSVLLNATVNSSVASFGRIGLFGNQGHVVNIPLSVMVKISYNLTTS 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2160g00015 845 CDD Peptidases_S8_3 147 654 IPR034197 -
Gabi2160g00015 845 ProSitePatterns Serine proteases, subtilase family, serine active site. 618 628 IPR023828 -
Gabi2160g00015 845 Gene3D Peptidase S8/S53 domain 174 708 IPR036852 GO:0004252|GO:0006508
Gabi2160g00015 845 ProSiteProfiles Serine proteases, subtilase domain profile. 152 695 - -
Gabi2160g00015 845 CDD PA_subtilisin_like 396 528 - -
Gabi2160g00015 845 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 100 833 IPR045051 -
Gabi2160g00015 845 PRINTS Subtilisin serine protease family (S8) signature 617 633 IPR015500 -
Gabi2160g00015 845 PRINTS Subtilisin serine protease family (S8) signature 172 191 IPR015500 -
Gabi2160g00015 845 PRINTS Subtilisin serine protease family (S8) signature 252 265 IPR015500 -
Gabi2160g00015 845 FunFam Subtilisin-like protease SBT1.5 174 396 - -
Gabi2160g00015 845 SUPERFAMILY Subtilisin-like 147 699 IPR036852 GO:0004252|GO:0006508
Gabi2160g00015 845 Gene3D - 712 837 - -
Gabi2160g00015 845 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 177 188 IPR023827 -
Gabi2160g00015 845 Pfam Fibronectin type-III domain 741 834 IPR041469 -
Gabi2160g00015 845 Pfam Subtilase family 172 662 IPR000209 GO:0006508|GO:0008236
Gabi2160g00015 845 Gene3D - 387 555 - -
Gabi2160g00015 845 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 145 IPR037045 -
Gabi2160g00015 845 Pfam Peptidase inhibitor I9 34 147 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2160g00015 Gabi-Chr2160 227514 234680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2160g00015 1 839 Subtilisin-like Serine Gene Family AT4G20430 67.995 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2160g00015 - - gmx:100796456 1482.62