Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2157g00019 ATGTCAGTCAAAGCTCCCCAAAGAAAATATGATGTTTTTGTTAGCTTCAGGGGCGAGGACATTGGCCATGGCTTTCTCGGCCATTTGATTGATGCTTTTCGTCGAAAGCAAATATTTGCCTTTGTAGATGATAAACTTGAAAGAGGAGATGATATATCATCATCACTTTTTGGAGCAATCGAAACATCATTAATTTCATTGATCATATTCTCAGAAGACTATGCTTCTTCACATTGGTGTCTGGAAGAACTTGAGAAAATAGTTGAGTGCAGAGATAAATATGGACAGACTGTAATACCTATTTTCTACAATGTAGATCCCACAATTGTAAGGCATCAAAAGGAGAGTTATGGAAATGCGCTTGCTAAACATGAAGAAAAGTATAATTTGAAAAGGGTGCAAACATGGAGAGATGCTTTGCACAAATCTGCAAATTTATCTGGAATTAAGTCATCGGATTTTCGGGATGATGTCCAGCTGCGCGATGAAATCATCAAAACCGTCAATCATCAATTAATGATGAGGTTAAATAAGCAGCCAATTCAGTCAAAAGGACTTGTTGGAATTGGCAAAGGAACTGCACATTTAGAACCTTTGTTACGTCAAGATTCAAAAGACGTGCGTGTTATTGGAATTTGGGGTATGGGTGGTATTGGTAAGACAACCATTGCACAAGAAGTTTTTAACAAACTAAGTTCTGAATATGAAGGTTGTTGTTTTTTGGCAAATGTAAGAGAAGAATCAACAAGAGGTAGAATCAGTTCCTTAAAAGAGAAACTTTTTTCTACACTATTAGCGGAAGATGTGAAATTTAACACACAAAATGAATTGCCCGGTTATGTGATGATGAGGCTTGGTCGTATGAAAGTTCTCATTGTTCTAGATGATGTCAATGATCCAGATCAACTAGAAACTTTAGTTGGATATCATGATAGCTTTGGATTAGGTAGTAGAATCATTGTAACAAGTAGAGATAAGCAAGTGTTTGTTAAAGAAGTTGATGATATATATGAGGTAGGGGCATTGGACTTTGATGAAGCACTTCAGCTTTTTACTTTGAATGCCTTCAAACAAAATCATCTTGAAATGGAGTACTATGAGCTATCAAAGAAGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTTTGTGGAAAAGGTAAGGAAGTATGGGAAAGTGAGCTAGACAAACTTGAAAAGATGCCAAATAAGAAAGTTTATGCTGTGATGAAACTGAGTTATGATGATCTAGATCGCAAAGAGCGAAAGATGTTTTTAGATCTTGCATGTTTCTTTAGTGTATTGAATTTGAAAGTGGGCTACATAAAACTTTTATTGAAAGATCATGAAAGTGATAATTCAGTGGCTGTTGGTTTAGAAAGATTGAAAGACAAAGCTCTTATAATTATTTCTGAAGATAATGTCATCTCTGTGCATGATATTATACAAGAAATGGCTTGGGAGATTGTTTGCCAGGAATCTAGTGAAGACCTTGGAAGCCGCAGTCATTTGGGGGATGCTAATGACATTTATGAACTATTAAAATATGACAAGGGGAGTATGGCTATTAGAAGTATAAGGGCGTCGTTCTCAGGAGGCAGAAAGCTCATGTTGAGCCCTCACGTATTCACTAAGATGAGCAAACTACAATTTCTGCATTTTTTTGTCAGATATGAACAAGATTTCTTGGATGCTCTTCATCAAGGGCTTCAGTCTTTGCCAACTGAACTAAGATATCTTCGTTGGACGAGATATCCTCTGAAATCCTTGCCAATGAAATTTTCTGCAGAAAAACTTGTTATGTTGGACTTATCAAGCAGTAGACTGGAAAAACTTTGGGATGGAGTACAGAATCTGGTGAATTTGAAAGAAGTTATACTCAGGCGTTCCTATTTTCTGAAGGAGCTGCCAGACTTTTCAAAAGCCACAAGTCTTGAAGTACTGGATATCGCTTCTTGTGAAATGTTGATTAGCGTGCATATTTTCTCTCTAGACAAACTTGAGAAAATGGATGCAAGTGGCTGCACTTCCCTTATCAGACTTACAAGCGATACCCATGCAAGCTCTCTCAACTATCTCAACCTTGGAAACTGCAAAAGTTTAAGGGAATTCTCAGTGACATCAGAGAATATCATAAAACTAAATTTAGAATTCACCCGTTTGGATGCATTGCCCTCATCTTTTGGACATCAAAGCAGGCTTGAAATCCTAGACCTTGCATGCTGTGACGTTGAGAGCTTGCCTTCATCCATAAAAAATCTTACAAGACTGCAACATCTATGCATACATGATTGTTTGAAGCTTCGGACTCTACCTGAGCTTCCCCCCTCCCTTGAAACTCTATTTGTCAAAGAGTGCACGTCACTAGAGACTGTATTGTTCCCTTCAACAATCACTGAACAATTCAATGAAATTAGGAGAAGGGTTCATTTCGGGAATTGCTCCAACTTAGTTGAACATTCTCTCATGGCTATTGAGTTGAATGCGCAAATTAACGTGATGAATTTGGCACACCAACATATATCCATGTCAGACCACAATTTTGTTGAAAATTACGGTGAAGATGCAACGTACATGTACATGTATCCAGGAAGTAGAGTTCCAGAGTGGTTGGAGTATAAGACGACAATTGATTATGTAAATATTGATCTCTCTTCTGCTCCACCCTCCCCTCAATTAGACTTCATTTTCTGCTTCATCATCGGAGAGAAACAATCAATTGAGTCATTGAAATTTATACTCATTGTCAATGATGGTGAGGATGAAGGTAACTTGGGCAGAGTCGATATGAACATGTCTAAGCAATCCGGCTTCACTGACTCTGATTGTGTGTGTGTGATGTACGACCAGTGTTGTTCCTACTACCTAAATATCATTGCCAAAAGACTGACCAGGTTAAAGATCAAGGTTACAGCAAGATCAGAAACAAAATATAACCGGATTGCGTTAAAAGGGTATGGGGGATATCGAGCTACTAGCTTGTCACAAGCAGGTTCACCCCCCGATTCAACAGAGGTTGTTTCAGTTTCTACCTCTGTAAAAAATGACGCCATGAAAACCTAG 3084 0.3807 MSVKAPQRKYDVFVSFRGEDIGHGFLGHLIDAFRRKQIFAFVDDKLERGDDISSSLFGAIETSLISLIIFSEDYASSHWCLEELEKIVECRDKYGQTVIPIFYNVDPTIVRHQKESYGNALAKHEEKYNLKRVQTWRDALHKSANLSGIKSSDFRDDVQLRDEIIKTVNHQLMMRLNKQPIQSKGLVGIGKGTAHLEPLLRQDSKDVRVIGIWGMGGIGKTTIAQEVFNKLSSEYEGCCFLANVREESTRGRISSLKEKLFSTLLAEDVKFNTQNELPGYVMMRLGRMKVLIVLDDVNDPDQLETLVGYHDSFGLGSRIIVTSRDKQVFVKEVDDIYEVGALDFDEALQLFTLNAFKQNHLEMEYYELSKKVVNYAKGIPLVLKVLGHLLCGKGKEVWESELDKLEKMPNKKVYAVMKLSYDDLDRKERKMFLDLACFFSVLNLKVGYIKLLLKDHESDNSVAVGLERLKDKALIIISEDNVISVHDIIQEMAWEIVCQESSEDLGSRSHLGDANDIYELLKYDKGSMAIRSIRASFSGGRKLMLSPHVFTKMSKLQFLHFFVRYEQDFLDALHQGLQSLPTELRYLRWTRYPLKSLPMKFSAEKLVMLDLSSSRLEKLWDGVQNLVNLKEVILRRSYFLKELPDFSKATSLEVLDIASCEMLISVHIFSLDKLEKMDASGCTSLIRLTSDTHASSLNYLNLGNCKSLREFSVTSENIIKLNLEFTRLDALPSSFGHQSRLEILDLACCDVESLPSSIKNLTRLQHLCIHDCLKLRTLPELPPSLETLFVKECTSLETVLFPSTITEQFNEIRRRVHFGNCSNLVEHSLMAIELNAQINVMNLAHQHISMSDHNFVENYGEDATYMYMYPGSRVPEWLEYKTTIDYVNIDLSSAPPSPQLDFIFCFIIGEKQSIESLKFILIVNDGEDEGNLGRVDMNMSKQSGFTDSDCVCVMYDQCCSYYLNIIAKRLTRLKIKVTARSETKYNRIALKGYGGYRATSLSQAGSPPDSTEVVSVSTSVKNDAMKT 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2157g00019 1027 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 799 IPR044974 GO:0006952
Gabi2157g00019 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 435 IPR027417 -
Gabi2157g00019 1027 Gene3D - 174 335 IPR027417 -
Gabi2157g00019 1027 Pfam TIR domain 9 180 IPR000157 GO:0007165
Gabi2157g00019 1027 Gene3D - 421 495 IPR036388 -
Gabi2157g00019 1027 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 174 - -
Gabi2157g00019 1027 Gene3D Ribonuclease Inhibitor 536 693 IPR032675 -
Gabi2157g00019 1027 Gene3D Ribonuclease Inhibitor 694 846 IPR032675 -
Gabi2157g00019 1027 SMART till_3 9 146 IPR000157 GO:0007165
Gabi2157g00019 1027 Gene3D - 341 420 IPR042197 -
Gabi2157g00019 1027 MobiDBLite consensus disorder prediction 1001 1027 - -
Gabi2157g00019 1027 PRINTS Disease resistance protein signature 647 663 - -
Gabi2157g00019 1027 PRINTS Disease resistance protein signature 209 224 - -
Gabi2157g00019 1027 PRINTS Disease resistance protein signature 376 390 - -
Gabi2157g00019 1027 PRINTS Disease resistance protein signature 284 298 - -
Gabi2157g00019 1027 SUPERFAMILY "Winged helix" DNA-binding domain 411 501 IPR036390 -
Gabi2157g00019 1027 Pfam NB-ARC domain 197 422 IPR002182 GO:0043531
Gabi2157g00019 1027 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 148 IPR035897 -
Gabi2157g00019 1027 SUPERFAMILY L domain-like 540 852 - -
Gabi2157g00019 1027 ProSiteProfiles TIR domain profile. 8 172 IPR000157 GO:0007165
Gabi2157g00019 1027 Gene3D - 4 173 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2157g00019 Gabi-Chr2157 251302 269355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2157g00019 8 806 WRKY Transcription Factor Family AT4G12020 30.920 1.68e-85 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2157g00019 - - aprc:113850949 1171.76