Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2155g00043 ATGTCTTCCTCGTCTTCTACTTCTTCTTCTTCTTCATCGTCATCATCATCATCATTATCACCATCTTCATCTTCAACCCCTCATGACACTTCAAATGTTGCTCCTGATATCCCTGGCCCTAGTACGAGGAGGACCGCTGAATTTGAAGGACCATCTTCTTCTCGTCGACGTGCTATGAATGAGGTTTGGCCTGAGTTTGTTCTTGAAACATTGGCACCTCGTGTTGCCATTGATGCTGCTAACTATGATGGTCGTCTTGCTGCAGCTTCTGCACTTGCCATTATGTTTCAGGTTTGTTCTACCTGGCGAGCGTTGTCGAGCTCGGATCCCCTGTGGGAGTACCTCACCAGACAAATCTGGCGCCGCACTTGTCGTTTGAGGCCCACGTGGCACCAAGAGTATATCTACTGGCATCGGACGGCCAGGAACTTCACAACAGGAACAAACTCATTTTTTATCCCTCGATTCGACCCTTCCGACGCCGGCGATCACCACATCTGCCGCTGCCTCACCCTCTCCGACCGCTACCTCGCCTGCGGCTTCTCCGACGGCACTGTCCGCCTATTCGACCTAGACACCCGCGTCCACGTCAGCACTTTCCGATCAATCTACGTCCACCGCTTCGGCCCCTTCTCGCTGTCCGTCTCCGGCATCGTCATCACCAATTCAGTTCTCACCTTCGCCAGGCTGGACGGCGACGTCTACGTGGCAATCATCAACGGGTCCACAACCACGCGCCGGGCCATTGCTGGTGACGTGGTGAACAACGGCGTGTTGGTGGAGTTCGCCGGGTGCAGCCACTGGTGGGTGGGCCTGTTCGCGGGCCTTCCCGGCCGGGCTTTTCAGATATGGAACGCCCACACGGAACAGCGAGTGTTCGTTGGCGGTTCACTAACCGACCCGGAAACCGTTATGGGGTGGCACATGCTAACAGAGTTGGTTGAACCGGTGGGTAGAGTCCGCGTAACGGAACAGGAGTTTGTTGTAGCGTGCACGAGTTCGAGGCTGGTTTGTTTCTACCTGTGGAACCCCGAGGTTTTGTTGCGTGATGTGGGGTCCACAACAGGGTTCGTGGTGACCTCTTTAGACGTGAGCCACGAGGCGTTTGGTATAGTGGAGAGAAACGGCGTGGGAACGGTGCGACGCGCCAGCACGTTGGAACGGCTCAGCAGGTTTCGGTTGAGGGTTTCGTGGCTTAGGGGGTTGTTGGGGTGCATGAACCTTGGGTACTACATAACATACTCTGGGGGTTCGGGTGTGTTGAGAGTGTGGGACATAGAGCACCCTGTGGGTCAATTGCGTGTGCGTGTTGCGGTTAGAGCAGGAGATGGAAACAGCATGGTGGGTAATCAAAGACATGTGGCCATCTCTTGGAATGACACTTCCATACTCTTATTGGATTTTGGTGTACAGGAGGATTAG 1422 0.5464 MSSSSSTSSSSSSSSSSSLSPSSSSTPHDTSNVAPDIPGPSTRRTAEFEGPSSSRRRAMNEVWPEFVLETLAPRVAIDAANYDGRLAAASALAIMFQVCSTWRALSSSDPLWEYLTRQIWRRTCRLRPTWHQEYIYWHRTARNFTTGTNSFFIPRFDPSDAGDHHICRCLTLSDRYLACGFSDGTVRLFDLDTRVHVSTFRSIYVHRFGPFSLSVSGIVITNSVLTFARLDGDVYVAIINGSTTTRRAIAGDVVNNGVLVEFAGCSHWWVGLFAGLPGRAFQIWNAHTEQRVFVGGSLTDPETVMGWHMLTELVEPVGRVRVTEQEFVVACTSSRLVCFYLWNPEVLLRDVGSTTGFVVTSLDVSHEAFGIVERNGVGTVRRASTLERLSRFRLRVSWLRGLLGCMNLGYYITYSGGSGVLRVWDIEHPVGQLRVRVAVRAGDGNSMVGNQRHVAISWNDTSILLLDFGVQED 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2155g00043 473 PANTHER WD40 REPEAT PROTEIN 12, 37 10 460 - -
Gabi2155g00043 473 SUPERFAMILY WD40 repeat-like 164 434 IPR036322 GO:0005515
Gabi2155g00043 473 SUPERFAMILY F-box domain 92 152 IPR036047 GO:0005515
Gabi2155g00043 473 Gene3D - 160 470 IPR015943 GO:0005515
Gabi2155g00043 473 MobiDBLite consensus disorder prediction 1 38 - -
Gabi2155g00043 473 MobiDBLite consensus disorder prediction 1 56 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Gabi2155g00043 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2155g00043 - - gmx:100807240 617.846