Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2155g00015 ATGGATATCTGTTTTGTTGCGGCATCAGAGCAACATAGAGGCTCAAGTATGTACTATCAACCATTGCAACAAATTGAAGCCTACAGCTTGCCGCAGTATCGAACTCTAAACCATCAGCTATACTACAACAATGAAGGCCATGGAACCCACTTCTCCACTCCAAGTTCTTCTGAATTTTACTGCACATTGGAGTCATCCTCTGCAACTGGCAGTTTCACTGTTTACAACTCCCCTTCAACTGTTAGTTTCTCACCCAATGGTAGCCCAATATCGCAGCAAGATTCTCAGTCATATCCACCTGACCAGGATCATTCCCCTGATAATAACTATGGCTCTCCAATGAGCGGGTCCTGCATAACCGATGATGTAAGTAACTTCAAGCACAAGCTGAGAGAGTTGGAAAGTGTAATGTTTGGCCCCGACTCTGATAATCTTGATAGTTATGACAGTGCCATCAGCAATGGAACCAACTTTGTGCCACCTGAGATGGATTGTTGGAGACAAACAATGATAGCAATTTCTAGTAAAAACCTAAAGCACATCCTTATTGCATGTGCTAAAGCAATTGCAGACAATGATTTGCTAATGGCACAATGGCTGATGGACGAATTACGGCAGATGGTGTCAGTTTCTGGTGAACCAATTCAAAGATTGGGAGCATACATGTTGGAAGGACTTGTTGCGCGATTGGCTGCCTCTGGGAGTTCAATCTACAAATCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCATACATGCATATACTTTATGAGGTTTGCCCCTACTTCAAATTTGGATACATGTCAGCAAATGGAGCAATTGCAGAAGCTATGAAAGCTGAAGACAGAGTTCATATAATTGATTTCCAAATTGCTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCGGCAAGGCCCGGAGGACCACCGCACATTCGGATTACTGGTATTGATGATTCAACATCAGCTTATGCCCGTGGTGGTGGACTGCATATAGTGGGAAAGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCATTTGAATTTCATGCTGCAGCTGTCTCTGGTTGTGATATTCAACTACATAACCTTGGAGTTCGACCAGGGGAAGCTCTGGCTGTAAATTTTGCATTCATGCTACATCACATGCCTGATGAAAGTGTCAGCACTCAGAATCATAGGGATAGACTGTTGAGGTTGGTAAAGAGCCTATCACCAAAGGTGGTGACACTTGTTGAGCAAGAATCTAACACGAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGAACTATTACACAGCAATGTTTGAGTCAATAGATGTAACTCTTCCCAGAGATCATAAAGAGCGAATCAATGTTGAGCAGCATTGCTTGGCAAGAGATATAGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAGCGACATGAGCTGCTTGGGAAGTGGAAGTCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTTTGAGTTCATTGGTGAATGTTACTATTAAGAAATTGCTTGAGAACTACAGTGATAGATATAGACTTGAAGAGAAAGATGGAGCTCTATATCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAGATGA 1647 0.4274 MDICFVAASEQHRGSSMYYQPLQQIEAYSLPQYRTLNHQLYYNNEGHGTHFSTPSSSEFYCTLESSSATGSFTVYNSPSTVSFSPNGSPISQQDSQSYPPDQDHSPDNNYGSPMSGSCITDDVSNFKHKLRELESVMFGPDSDNLDSYDSAISNGTNFVPPEMDCWRQTMIAISSKNLKHILIACAKAIADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLAASGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKAEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAVSGCDIQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYTAMFESIDVTLPRDHKERINVEQHCLARDIVNIIACEGVERVERHELLGKWKSRFAMAGFTPYPLSSLVNVTIKKLLENYSDRYRLEEKDGALYLGWMNRDLVASCAWR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2155g00015 548 Pfam GRAS domain family 178 548 IPR005202 -
Gabi2155g00015 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Gabi2155g00015 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 137 542 IPR005202 -
Gabi2155g00015 548 MobiDBLite consensus disorder prediction 83 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2155g00015 Gabi-Chr2155 95817 99218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2155g00015 17 548 GRAS Transcription Factor Family AT5G48150 66.171 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2155g00015 GRAS 2.4e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2155g00015 - - gmx:100808300 997.653