Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2155g00014 ATGGTTTCTTCAGAAGAAAGCGCAGACCATAATGTTTCTTCTAATAAATTGCAGCAAAGAGTGAGTCCTCTTAGCGATACTACCTTGTCACAAGGGATTCATGATACTAAAATTCATTTGTCCAGACAAGTTCCTTCTATTGTAGCTCAAAACGAAGTGAAGGATTCTGATGCTACTGCTTGTGCCTTGAAATCAGATCAAGAAGGAAGCATATACTCTTTAACATTTGAGAAACATTTGCAGAGCCCTGATAATGTTTCGCATGAATTGCCTCCATTGCAATCTGGTCAGGACAGTCCCTCTATAATACGTGAAAGGGTATCAAAAGATGGCTATAACTGGAGAAAATATGGCCAGAAACATGTTAAGGGGAATGAATTTATAAGGAGCTATTATAAGTGTACACATCCAAACTGCCAGGCAAAAAAGCAATTGGAGCAGTCGAATAATGGGCATATTACAGATTCCATTTGCATCGGTCAGCATAATCATCCTAGACCTCAACTGAACACCATACCACCAGTTGATTGTGTTCTTCCTGTTGTTGAAGAAGGGCCTCACAAAACTTCTTCAGCCAATGTGGAAGAGAAAGCATCCGTTGAGCATGGATGTATGCCTCAACAGATCAAGTCTTTACATTCCCTTCCAACTTCAAAAGTTTCCCCAGATGATGAGTTGAAAGCTGCACATTTACAATTGACTAAGGCAAAGGATGAGGTTCATAACAATGAGAATCCTGAGTCAAAGCGGCTGAAGAAAGACAATTGTAACGCTGATATCACTGGGGTTGACAAGTCAATTTGTGAGTCTCGTGTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAACTAGTTAAAGGGAATACAAATCCAAGGAGTTATTATCGATGCTCGAATCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAATTGTAATAACTACCTATGAGGGACAACATGATCATGAAATCCCCCCAGTAAGGACTGTCACTCATAATGCAGCTACAAATACTCAGACAATGATCACTGATGGCAAGTTTGGAACCAAATCTAGAGGTAATATTGTTGGTGTTGATACAGGGGAAAGCAGCTACTTGGACTCAGAAAGCAGATTAAATCAGCAACTAAATGGCGAGTCAATTACTAAATTAAAGGATGGTGAGATGGTTGAATTTGGTGTGGTCAGCTTGTGTAGTAAGGGTCCTGAACTTAAATTGAGTGAGCAAGAACAACAAAATGATAACTCGGGTACCAAAGACGATTCTAGCAATGACATCATATGCCATTCAAGTTCCGAAGTTCCATGTAGATCAAATGAACAGCTGAAAGATGAGGTGAAAACTAAATCAGGAGGAAGTAAGGATTGCGTCAATGTGGTTGCCGTTCATGATACTCCTAGTTCAGAAAGTGAATTTAATAAGCAATCAACATCTGATGCTGAACCTGTCCAAAGCTAA 1512 0.4008 MVSSEESADHNVSSNKLQQRVSPLSDTTLSQGIHDTKIHLSRQVPSIVAQNEVKDSDATACALKSDQEGSIYSLTFEKHLQSPDNVSHELPPLQSGQDSPSIIRERVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLEQSNNGHITDSICIGQHNHPRPQLNTIPPVDCVLPVVEEGPHKTSSANVEEKASVEHGCMPQQIKSLHSLPTSKVSPDDELKAAHLQLTKAKDEVHNNENPESKRLKKDNCNADITGVDKSICESRVVVQTSSEVDFVNDGYRWRKYGQKLVKGNTNPRSYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHEIPPVRTVTHNAATNTQTMITDGKFGTKSRGNIVGVDTGESSYLDSESRLNQQLNGESITKLKDGEMVEFGVVSLCSKGPELKLSEQEQQNDNSGTKDDSSNDIICHSSSEVPCRSNEQLKDEVKTKSGGSKDCVNVVAVHDTPSSESEFNKQSTSDAEPVQS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2155g00014 503 MobiDBLite consensus disorder prediction 481 503 - -
Gabi2155g00014 503 SUPERFAMILY WRKY DNA-binding domain 104 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 355 IPR044810 GO:0003700
Gabi2155g00014 503 Gene3D WRKY domain 270 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 FunFam WRKY transcription factor 57 269 343 - -
Gabi2155g00014 503 ProSiteProfiles WRKY domain profile. 278 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 SMART WRKY_cls 283 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 SMART WRKY_cls 108 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 MobiDBLite consensus disorder prediction 423 455 - -
Gabi2155g00014 503 ProSiteProfiles WRKY domain profile. 103 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 SUPERFAMILY WRKY DNA-binding domain 275 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 FunFam WRKY transcription factor 97 168 - -
Gabi2155g00014 503 MobiDBLite consensus disorder prediction 421 503 - -
Gabi2155g00014 503 MobiDBLite consensus disorder prediction 1 28 - -
Gabi2155g00014 503 Pfam WRKY DNA -binding domain 109 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 Pfam WRKY DNA -binding domain 284 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2155g00014 503 Gene3D WRKY domain 101 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2155g00014 Gabi-Chr2155 89112 93279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2155g00014 93 351 WRKY Transcription Factor Family AT2G04880 50.752 3.26e-85 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2155g00014 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2155g00014 K18834 - gmx:100782726 759.214