Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2155g00011 ATGCCTGCTGAGAAGTCGAACACTTGCGACGGAGAAGTGGAAGCGTTTGTTGAAATTGACCCAACGGGTAGGTTTGGGCGTTACAATGATCTGCTCGGTTATGGAGCTGTGAAAAGGGTTTACAGGGCATTTGATCAAGAGGAAGGGATTGAGGTGGCGTGGAATCAGGTTCGGCTCAGGAATTTCAGCGATGACCCTGTTCTCATAAATAGGCTTCATTCTGAGGTTGAGTTGCTTAGAAATCTGAGCAACAAGTATATCATTGTGTGTTACAGTGTGTGGAAAGATGATGATCGCCACACTATTAATTTCATTACTGAGGTTTGCACTTCTGGGAATCTTAGGGATTACAGAAAAAAGCATCGTCATGTGTCCATTAAGGCTTTCAAGAAATGGTCTAAACAAGTACTTGAGGGATTGGAGTATCTTCATACACATGATCCTTGCATTATTCACAGAGATCTCAATTGCAGTAACATCTTTGTTAACGGCAACATTGGCCAGGTGAAAATTGGTGATCTCGGATTGGCTGCTATAGTGGGACGGAGCCATGCTGCACATTCAATTTTAGGGACACCTGAGTATATGGCACCGGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAAATGGTTACGATGGAGATACCCTACTGTGAATGTGACAGTGTCGCCAAGATATACAAAAAGGTCACCATGGGAATTAAGCCTCAGTCCTTGAGCAAAGTCTCAGATCCAGAGGTGAAGTCTTTCATTGAGAAGTGCATAGCACAACCAAGGGCAAGACCTTCAGCCACGGATCTCCTTAAGGATCCTTTTTTTTATGAACTCAACAATGATGAAGAATCAACGCCAACCAATTGA 894 0.4329 MPAEKSNTCDGEVEAFVEIDPTGRFGRYNDLLGYGAVKRVYRAFDQEEGIEVAWNQVRLRNFSDDPVLINRLHSEVELLRNLSNKYIIVCYSVWKDDDRHTINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYCECDSVAKIYKKVTMGIKPQSLSKVSDPEVKSFIEKCIAQPRARPSATDLLKDPFFYELNNDEESTPTN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2155g00011 297 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Gabi2155g00011 297 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2155g00011 297 CDD STKc_WNK 24 284 - -
Gabi2155g00011 297 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Gabi2155g00011 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2155g00011 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 287 - -
Gabi2155g00011 297 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Gabi2155g00011 297 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Gabi2155g00011 297 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2155g00011 Gabi-Chr2155 81521 83910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2155g00011 10 284 MAP Kinase Kinase Kinase AT5G55560 77.091 4.36e-169 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi2155g00011 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2155g00011 K08867 - gmx:100807414 576.244