Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2155g00011 | ATGCCTGCTGAGAAGTCGAACACTTGCGACGGAGAAGTGGAAGCGTTTGTTGAAATTGACCCAACGGGTAGGTTTGGGCGTTACAATGATCTGCTCGGTTATGGAGCTGTGAAAAGGGTTTACAGGGCATTTGATCAAGAGGAAGGGATTGAGGTGGCGTGGAATCAGGTTCGGCTCAGGAATTTCAGCGATGACCCTGTTCTCATAAATAGGCTTCATTCTGAGGTTGAGTTGCTTAGAAATCTGAGCAACAAGTATATCATTGTGTGTTACAGTGTGTGGAAAGATGATGATCGCCACACTATTAATTTCATTACTGAGGTTTGCACTTCTGGGAATCTTAGGGATTACAGAAAAAAGCATCGTCATGTGTCCATTAAGGCTTTCAAGAAATGGTCTAAACAAGTACTTGAGGGATTGGAGTATCTTCATACACATGATCCTTGCATTATTCACAGAGATCTCAATTGCAGTAACATCTTTGTTAACGGCAACATTGGCCAGGTGAAAATTGGTGATCTCGGATTGGCTGCTATAGTGGGACGGAGCCATGCTGCACATTCAATTTTAGGGACACCTGAGTATATGGCACCGGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAAATGGTTACGATGGAGATACCCTACTGTGAATGTGACAGTGTCGCCAAGATATACAAAAAGGTCACCATGGGAATTAAGCCTCAGTCCTTGAGCAAAGTCTCAGATCCAGAGGTGAAGTCTTTCATTGAGAAGTGCATAGCACAACCAAGGGCAAGACCTTCAGCCACGGATCTCCTTAAGGATCCTTTTTTTTATGAACTCAACAATGATGAAGAATCAACGCCAACCAATTGA | 894 | 0.4329 | MPAEKSNTCDGEVEAFVEIDPTGRFGRYNDLLGYGAVKRVYRAFDQEEGIEVAWNQVRLRNFSDDPVLINRLHSEVELLRNLSNKYIIVCYSVWKDDDRHTINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYCECDSVAKIYKKVTMGIKPQSLSKVSDPEVKSFIEKCIAQPRARPSATDLLKDPFFYELNNDEESTPTN | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2155g00011 | 297 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 289 | - | - | |
Gabi2155g00011 | 297 | Pfam | Protein kinase domain | 30 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2155g00011 | 297 | CDD | STKc_WNK | 24 | 284 | - | - | |
Gabi2155g00011 | 297 | FunFam | Probable serine/threonine-protein kinase WNK1 | 11 | 107 | - | - | |
Gabi2155g00011 | 297 | ProSiteProfiles | Protein kinase domain profile. | 26 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2155g00011 | 297 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 11 | 287 | - | - | |
Gabi2155g00011 | 297 | Gene3D | Phosphorylase Kinase; domain 1 | 11 | 107 | - | - | |
Gabi2155g00011 | 297 | FunFam | probable serine/threonine-protein kinase WNK9 | 109 | 290 | - | - | |
Gabi2155g00011 | 297 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 284 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2155g00011 | Gabi-Chr2155 | 81521 | 83910 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2155g00011 | 10 | 284 | MAP Kinase Kinase Kinase | AT5G55560 | 77.091 | 4.36e-169 | 469 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | WNK_NRBP | Gabi2155g00011 | Pkinase | 1.9e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2155g00011 | K08867 | - | gmx:100807414 | 576.244 |