Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2153g00009 ATGTCAATTTTTCTTCATGAAATCTTCTCAAACTGGTTGTTCCTCACTATGGCTGTGTTGATCATCTTTGTTCTAAGTACCTTTCTCAATCTTGTATCCAAATGGAACACCAAATCTTCAACCAACAAAAACTCACCCCCATCTCCTCCAAAGCTTCCAATACTAGGAAATCTGCATCAGCTTGGAATGTTCCCTCACCACACACTCCAATCCATTGCTCAAATCTATGGCCCCTTGATGTTGCTTCACTTTGGAAAGGTGCCAGTTCTTGTGGTCTCAACTGCTGAGGCAGCTCGTGAGGTTATGAAAACACATGATCTTGTTTTCTCCAATAGGCCACACCGAAAGATGTTTGATACACTCTTTTATGGTTCTAAAGATGTGGCATTTGCTCCATATGGCCACTACTGGAGGCAAACAAGGAGTGTATGTATCTTGCATCTTCTGAGTGCCAAAAAGGTTCAATCTTTTCGTGCAGTGAGGGAAGAGGAAACTTTTATAATGATGGAGAAAATCAAACAAGCTGCTCTTGGAAGGAGATATAGTGGAGAAGGTGGTAGTAAGCTTAGGGAGCCAATGAACGAGTTGGTGGAACTGTTGGGTGCTTCAGTTTTAGGGGACTATATACCTTGGCTTGATTGGTTGAGCAGAGTTAATGGCCTATATGCTAGAGCAGAGAGAGTAGCTAAACAGCTTGATGAGTTTTTGGATGAAGTTGTTGAAGAGCATGTTAAGAGAGGCAATGATGAAAATGTTGATGTTGATGGAGAAGGCCAGAATGATTTTGTGGACATTTTACTGTGCATCCAAAAGACAAACTTCACTGGCTTCCAGATTGATAGAACAACCATAAAGGCTTTGATCATGGATATGTTTGTTGCTGGTACTGAAACTAACTTATCAGTGCTAGAGTGGGCAATGACAGAACTCTTGAGGCACCCAATTGTGATGCAGAACTTGCAAGTTGAGGTGAGGAATGTGGTTAGTGATGATAAAACTCACATAACTGAGGAGGATTTGAGTGGCATGCATTACTTGAAGGCAGTGGTTAAAGAAACTCTTCGCTTACACCCTCCAGCTCCCTTATTGCTTCCAAGAGAATCCTTTCAAGATACCAAAGTTATGGACTATAACATTGATACTGGCACACAGGTATTAGTTAATGCTTGGGCTATTGCTAGAGATCCTTCACATTGGTATCAGCCACTAGAGTTTCAACCTGAGAGATTCTTGAACAGTTCAATAGATATCAAAGGACATGATTTCCAATTGATCCCATTTGGAGCAGGAAGGAGGGGTTGCCCAGGATTAACATTTGCTATGGTTGTGAATCAGCTTGTTCTAGCAAACCTTGTCTTCCAATTTGATTGGACATTGCCTAGTGGAGAAATGGGGGTTCAGGCATTGGACATCTCTGAAGCTACTGGGTTGGCTAGTCACAGAAAATTTCCTCTTGTGGCAGTTGCATCCCCATATAAGAAGTGA 1485 0.4189 MSIFLHEIFSNWLFLTMAVLIIFVLSTFLNLVSKWNTKSSTNKNSPPSPPKLPILGNLHQLGMFPHHTLQSIAQIYGPLMLLHFGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDTLFYGSKDVAFAPYGHYWRQTRSVCILHLLSAKKVQSFRAVREEETFIMMEKIKQAALGRRYSGEGGSKLREPMNELVELLGASVLGDYIPWLDWLSRVNGLYARAERVAKQLDEFLDEVVEEHVKRGNDENVDVDGEGQNDFVDILLCIQKTNFTGFQIDRTTIKALIMDMFVAGTETNLSVLEWAMTELLRHPIVMQNLQVEVRNVVSDDKTHITEEDLSGMHYLKAVVKETLRLHPPAPLLLPRESFQDTKVMDYNIDTGTQVLVNAWAIARDPSHWYQPLEFQPERFLNSSIDIKGHDFQLIPFGAGRRGCPGLTFAMVVNQLVLANLVFQFDWTLPSGEMGVQALDISEATGLASHRKFPLVAVASPYKK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2153g00009 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Gabi2153g00009 494 CDD CYP71-like 76 485 - -
Gabi2153g00009 494 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PANTHER CYTOCHROME P450 71B11-RELATED 25 490 - -
Gabi2153g00009 494 SUPERFAMILY Cytochrome P450 46 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 FunFam Cytochrome P450 83B1 172 488 - -
Gabi2153g00009 494 Gene3D Cytochrome P450 30 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 Pfam Cytochrome P450 46 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2153g00009 494 Pfam Cytochrome P450 167 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2153g00009 Gabi-Chr2153 137058 138721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2153g00009 38 490 Cytochrome P450 AT3G48270 51.050 4.18e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2153g00009 - - gmx:100806940 694.501