Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2150g00013 ATGGTTGGTGACAACAATAACAACAGCAACAAGGAGAAGGAGAGAGACCTTGAGTTTTTGTTTGATGAGAACGATGAAGATGTCAACGAAGGTGAACAACAGGATATTGAAGCTGAGAAGTTCGAGAGTGAGAGTAGCAGTGGTGATGAGGGAAATCATACAACACAGCTTCAGTCTTTCAACTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTGCATCTCCATCAATTCTACGAGGACCAAGTTTTCTTTATTCTAGTTTTGGCAATCATTCAAAGAATAACTTAGACATAGATGGAAAGACTCCTTTTCTATCTGGTCAGGAAGGCATCAGTCAATCATCATGGTCGAAGAAAGCTTCAGTGCAAAGGCATTGTACTGGTGAATTGCCCATTGGTTACGGATGCAGCTTCACTCAAACAGTTTTCAATGGGATGAATGTGATGGCTGGAGTTGGCCTTCTGTCTACACCTTTTACAGTGAAAGAAGCTGGGTGGATGAGCATGGCGGTAATGCTTCTTTTTGCAGTTATTTGTTGTTATACAGCCAACCTTATGAGACACTGCTTTGAAACTAGAGAAGGAATCACGAGCTACCCCGATATCGGAGAAGCTGCATTTGGAAGATTTGGCCGAATTGTTGTATCAATCATTTTGTACACTGAATTATATGCATGTTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGAGCATTCTTAGATTTGGGTAGTTTCCGGTTAGATTCTGTGCACTTGTTTGGAATTTTGAGTGCACTTATTATTCTTCCTACAGTCTGGTTGAAGGATCTTCGCGTAATCTCTTATCTATCAGCTGGAGGGGTTGTTGCAACTTTCTTGATTGTTATCTGTGTGTTTTGTGTTGGGACAACAGATAGTGTTGGATTCCATCACACAGGACAATTGGTAAATTGGAGTGGCATTCCATTTGCTATTGGTATCTATGGGTTTTGCTATGCAGGACATTCAGTTTTTCCAAATATATATGAGTCTATGGCTGACAAAAAACAATTCACCAAAGCACTAATAACATGTGTTGTTTTGTGTATTTTGATATATGGAGGCGTTGCAATCATGGGATTTCTCATGTTTGGTGATGACACTTTGTCTCAGATAACATTAAATATGCCACCAGGTGCATTTGCTTCAAAAGTTGCAGTGTGGACAACAGTAATCAACCCATTCACTAAATATGCTTTGTTGATGAACCCACTGGCAAGGAGTCTAGAGGAGTTGCTGCCAAATAGAATTTCAAATACTTATTGGTGTTTCATTCTTCTTAGAACAGCACTTGTTGCATCTACAGTTTGTGCTGCTTTTCTGATTCCCTTTTTTGGGCTTGTGATGGCATTAATTGGTTCGCTCTTCAGTATACTTGTGTCAGTGATAATGCCAAGTTTATGTTTTCTAAAAATTGTGGGGAAAAAAGCTACAAATACGCAGGTTGCACTGAGCGTCATAATTACTGCATTGGGAATCATTTGTGGACTCCTTGGAACATATTCCTCTGTGTTGAATATTGTGGATAGTTACTAA 1596 0.3972 MVGDNNNNSNKEKERDLEFLFDENDEDVNEGEQQDIEAEKFESESSSGDEGNHTTQLQSFNSQQWPQSYKETTDSYTIAASPSILRGPSFLYSSFGNHSKNNLDIDGKTPFLSGQEGISQSSWSKKASVQRHCTGELPIGYGCSFTQTVFNGMNVMAGVGLLSTPFTVKEAGWMSMAVMLLFAVICCYTANLMRHCFETREGITSYPDIGEAAFGRFGRIVVSIILYTELYACCVEFITLEGDNLTSLFPGAFLDLGSFRLDSVHLFGILSALIILPTVWLKDLRVISYLSAGGVVATFLIVICVFCVGTTDSVGFHHTGQLVNWSGIPFAIGIYGFCYAGHSVFPNIYESMADKKQFTKALITCVVLCILIYGGVAIMGFLMFGDDTLSQITLNMPPGAFASKVAVWTTVINPFTKYALLMNPLARSLEELLPNRISNTYWCFILLRTALVASTVCAAFLIPFFGLVMALIGSLFSILVSVIMPSLCFLKIVGKKATNTQVALSVIITALGIICGLLGTYSSVLNIVDSY 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2150g00013 531 MobiDBLite consensus disorder prediction 19 33 - -
Gabi2150g00013 531 FunFam Amino acid transporter AVT1A 141 530 - -
Gabi2150g00013 531 Pfam Transmembrane amino acid transporter protein 144 523 IPR013057 -
Gabi2150g00013 531 MobiDBLite consensus disorder prediction 1 68 - -
Gabi2150g00013 531 Gene3D Amino acid/polyamine transporter I 142 529 - -
Gabi2150g00013 531 Coils Coil 10 30 - -
Gabi2150g00013 531 MobiDBLite consensus disorder prediction 48 68 - -
Gabi2150g00013 531 PANTHER OS05G0424000 PROTEIN-RELATED 146 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2150g00013 Gabi-Chr2150 192052 207639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2150g00013 5 466 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.728 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2150g00013 K15015 - gmx:100790344 863.988