Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi214g00004 ATGGCTGACATAGATCGCTCCTCTGATGGTGTTTCTGCAGATATTACAGAGCAATCCAGCCAAGCTTCAAAGGTTGAATTTTCTGAAGATGAGGAAATCCTTATTACTATGGTATATAACCTAGTTGGGGAGAGATGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAATTCCTGGAAGAACAGCAGAAGAAATAGAGAAGTATTGGACTTCAAGATACTCGACTAGCGAATGA 234 0.406 MADIDRSSDGVSADITEQSSQASKVEFSEDEEILITMVYNLVGERWSLIAGRIPGRIPGRTAEEIEKYWTSRYSTSE 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi214g00004 77 MobiDBLite consensus disorder prediction 1 26 - -
Gabi214g00004 77 Pfam Myb-like DNA-binding domain 24 70 IPR001005 -
Gabi214g00004 77 ProSiteProfiles Myb-like domain profile. 19 73 IPR001005 -
Gabi214g00004 77 SUPERFAMILY Homeodomain-like 25 73 IPR009057 -
Gabi214g00004 77 CDD SANT 29 69 IPR001005 -
Gabi214g00004 77 SMART sant 23 75 IPR001005 -
Gabi214g00004 77 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 74 - -
Gabi214g00004 77 Gene3D - 26 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi214g00004 28 71 MYB Transcription Factor Family AT5G35550 56.818 2.30e-10 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi214g00004 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi214g00004 - - gmx:100500494 117.087