Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2147g00030 ATGGGAATACATTTTGTTGGACTTTTTTTTGTGATATTTACTTCTTTGAGTGGTTTCAGATTGGGAGTAGAAGCCTTGAACATGAATTACTACTTGTTGAGCTGCCCTGTTGTTGAACCTGTTGTTAGGAACAAAGTCAGCAGAGCCCTGCAATATGATCCCACCCTAGCAGCTGCTCTTGTTAGATTGCATTTCCATGACTGTTTCTTACAGGGATGTGATGGGTCAGTTCTGATTGACTCCACTAAGAATAACACAGCAGAAAAGGATTCACCTGTAAATTTGAGCTTGAGAGGCTACCAAGTCATAGATGACATCAAAGAAGAGCTAGAAAAAAAATGCCCTGGAGTGGTTTCATGCGCTGATATTCTTGCAATGGCTGCTAGAGATGCAGTTTTCTTTGCTGGGGGTCCAGTGTATGACATACCAAAAGGAAGGAAGGATGGAACAAGGTCCAAAATTGAGGATACTCATAATCTGCCACCCCCCACCTTCAATGTTTCTGAGTTAATCAAAATGTTTGGTGAACATGGATTTTCTGCCAAAGAGATGGTGGCTCTCTCTGGAGCTCACACATTAGGAGTGTCAAAGTGTGTTTCTTTCAAGAATAGGCTGACCCAAGTGGATCCAACTTTGGACTCAGAATTTGCAAAGACACTGTCCAAAATATGCAATGCTGGAGACACTGCTGAGCTGTCCTTTGACACCACAAGGAATGATTTTGATAATTTATACTTCAAAACTTTGGTCACAAACAAAGGGGTTCTTACATCAGACCAAACACTGTACACTATCCCAAAGACGAGGAACATTGTGAACTCTTATGCTATGAATCAAGCCTTGTTTTTCTTAGATTTCCAACAAGCAATGGTGAAGATGAGCATGCTCGATGTCAAAGAAGGTTCCAATGGGGAAATACGAGAAAATTGCCGTAAAATAAACTGA 945 0.4106 MGIHFVGLFFVIFTSLSGFRLGVEALNMNYYLLSCPVVEPVVRNKVSRALQYDPTLAAALVRLHFHDCFLQGCDGSVLIDSTKNNTAEKDSPVNLSLRGYQVIDDIKEELEKKCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTHNLPPPTFNVSELIKMFGEHGFSAKEMVALSGAHTLGVSKCVSFKNRLTQVDPTLDSEFAKTLSKICNAGDTAELSFDTTRNDFDNLYFKTLVTNKGVLTSDQTLYTIPKTRNIVNSYAMNQALFFLDFQQAMVKMSMLDVKEGSNGEIRENCRKIN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2147g00030 314 Gene3D - 29 314 - -
Gabi2147g00030 314 FunFam Peroxidase 161 293 - -
Gabi2147g00030 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Gabi2147g00030 314 PANTHER - 16 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 FunFam Peroxidase 29 169 - -
Gabi2147g00030 314 SUPERFAMILY Heme-dependent peroxidases 26 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 ProSiteProfiles Plant heme peroxidase family profile. 25 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 Pfam Peroxidase 42 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Gabi2147g00030 314 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 CDD secretory_peroxidase 26 313 IPR033905 GO:0004601|GO:0042744
Gabi2147g00030 314 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2147g00030 314 Gene3D Peroxidase, domain 2 161 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2147g00030 Gabi-Chr2147 257046 269466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2147g00030 11 314 Peroxidase AT4G33420 65.789 2.39e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2147g00030 K00430 - gmx:100809245 506.138