Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2147g00022 ATGGGGTGCTCATTTTCTGGTCTTAATGCATTGTACGATTCCGTTAACGGAGGAGGGGATGTGTGGATCAACGAGAATCGGTTCCGCGTCATGAGGCAGCTCGGAGAAGGTGGTTTCGCCTACGTCTACCTCGTCAAGGAGGTTCTTGCCGACTCTGCTGCCGGTGGCCTCGCCAACAAGCTCAAACACTCCTCTCATCTCTCCGATGACGGAACTTATGCTATGAAAAAGGTTCTCATTCAGAACAATGAACAACTTGAGTTGGTCAGGGAGGAGATCCGTGTTTCATCACTGTTCAATCACCCGAATCTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAACCTACCCAAGAAACGTCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAAAAGGAATTCTATTCTACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTGAAACATATGCATAGTTTAGATCCTCCATATGCACATAACGATGTCAAACCTGGTAATGTTCTCTTAACACATAGAAAAGGACAACCGCCTCTTGCCATTCTTATGGATTTTGGCAGTGCTCGTCCTTCGAGGAGGCAAATTAGCTCCCGATCTGAGGCACTCCAGTTGCAGGAATGGGCTTCTGAACACTGCTCTGCTCCTTTCCGAGCTCCTGAACTGTGGGATTGCCCGAGCCATGCTGATATAGATGAGAGGACTGACATTTGGTCACTAGGATGCACATTATATGCGATAATGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTGTTGTAAATGCACAGGTCAAATGGCCAGCTGGACCTAAGCCTTCATATCCAGAAGCTCTTCGTCAGTTCGTGTCATGGATGCTTCAGCCCCAGGCTGCTGTGCGGCCCCGGATAGATGATATCATTATCCATGTTGACAAGTTGATTGCAAAGTTCTCTGAAGGTAACAGTGGGGCATGA 1044 0.4646 MGCSFSGLNALYDSVNGGGDVWINENRFRVMRQLGEGGFAYVYLVKEVLADSAAGGLANKLKHSSHLSDDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLKHMHSLDPPYAHNDVKPGNVLLTHRKGQPPLAILMDFGSARPSRRQISSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPSYPEALRQFVSWMLQPQAAVRPRIDDIIIHVDKLIAKFSEGNSGA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2147g00022 347 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 340 - -
Gabi2147g00022 347 CDD STKc_16 27 338 - -
Gabi2147g00022 347 Pfam Protein kinase domain 65 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2147g00022 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Gabi2147g00022 347 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Gabi2147g00022 347 SMART serkin_6 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2147g00022 347 Gene3D Transferase(Phosphotransferase) domain 1 15 344 - -
Gabi2147g00022 347 ProSiteProfiles Protein kinase domain profile. 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2147g00022 Gabi-Chr2147 172551 177631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2147g00022 33 332 EF-hand Containing Proteins AT4G04710 25.163 3.27e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Gabi2147g00022 Pkinase 5.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2147g00022 K08856 - gmx:100803659 659.062