Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2147g00021 ATGGGGTGCTCATTTTCTGGTCTTAATGCATTGTACGATTCCGTTAACGGAGGAGGGGATGTGTGGATCAACGAGAATCGGTTCCGCCTCAAACACTCCTCTCATCTCTCCGATGACGGAACTTATGCTATGAAAAAGGTTCTCATTCAGAACAATGAACAACTTGAGTTGGTCAGGGAGGAGATCCGTGTTTCATCACTGTTCAATCACCCGAATCTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAACCTACCCAAGAAACGTCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAAAAGGAATTCTATTCTACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTGAAACATATGCATAGTTTAGATCCTCCATATGCACATAACGATGTCAAACCTGGTAATGTTCTCTTAACACATAGAAAAGGACAACCGCCTCTTGCCATTCTTATGGATTTTGGCAGTGCTCGTCCTTCGAGGAGGCAAATTAGCTCCCGATCTGAGGCACTCCAGTTGCAGGAATGGGCTTCTGAACACTGCTCTGCTCCTTTCCGAGCTCCTGAACTGTGGGATTGCCCGAGCCATGCTGATATAGATGAGAGGACTGACATTTGGTCACTAGGATGCACATTATATGCGATAATGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTGTTGTAAATGCACAGGTCAAATGGCCAGCTGGACCTAAGCCTTCATATCCAGAAGCTCTTCGTCAGTTCGTGTCATGGATGCTTCAGCCCCAGGCTGCTGTGCGGCCCCGGATAGATGATATCATTATCCATGTTGACAAGTTGATTGCAAAGTTCTCTGAAGGTAACAGTGGGGCATGA 951 0.4511 MGCSFSGLNALYDSVNGGGDVWINENRFRLKHSSHLSDDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLKHMHSLDPPYAHNDVKPGNVLLTHRKGQPPLAILMDFGSARPSRRQISSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPSYPEALRQFVSWMLQPQAAVRPRIDDIIIHVDKLIAKFSEGNSGA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2147g00021 316 CDD STKc_16 36 307 - -
Gabi2147g00021 316 Gene3D Transferase(Phosphotransferase) domain 1 26 313 - -
Gabi2147g00021 316 SMART serkin_6 12 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2147g00021 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gabi2147g00021 316 SUPERFAMILY Protein kinase-like (PK-like) 35 301 IPR011009 -
Gabi2147g00021 316 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 34 309 - -
Gabi2147g00021 316 Pfam Protein kinase domain 35 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2147g00021 316 ProSiteProfiles Protein kinase domain profile. 1 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2147g00021 Gabi-Chr2147 172551 177632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2147g00021 41 301 EF-hand Containing Proteins AT4G04710 25.185 1.06e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Gabi2147g00021 Pkinase 6.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2147g00021 K08856 - gmx:100803659 597.045