Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2147g00020 ATGGGGTGCTCATTTTCTGGTCTTAATGCATTGTACGATTCCGTTAACGGAGGAGGGGATGTGTGGATCAACGAGAATCGGTTCCGCGTCATGAGGCAGCTCGGAGAAGGTGGTTTCGCCTACGTCTACCTCGTCAAGGAGGTTCTTGCCGACTCTGCTGCCGGTGGCCTCGCCAACAAGCTCAAACACTCCTCTCATCTCTCCGATGACGGAACTTATGCTATGAAAAAGGTTCTCATTCAGAACAATGAACAACTTGAGTTGGTCAGGGAGGAGATCCGTGTTTCATCACTGTTCAATCACCCGAATCTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAACAGCCTACCCAAGAAACGTCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAAAAGGAATTCTATTCTACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTGAAACATATGCATAGTTTAGATCCTCCATATGCACATAACGATGTCAAACCTGGTAATGTTCTCTTAACACATAGAAAAGGACAACCGCCTCTTGCCATTCTTATGGATTTTGGCAGTGCTCGTCCTTCGAGGAGGCAAATTAGCTCCCGATCTGAGGCACTCCAGTTGCAGGAATGGGCTTCTGAACACTGCTCTGCTCCTTTCCGAGCTCCTGAACTGTGGGATTGCCCGAGCCATGCTGATATAGATGAGAGGACTGACATTTGGTCACTAGGATGCACATTATATGCGATAATGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTGTTGTAAATGCACAGGTCAAATGGCCAGCTGGACCTAAGCCTTCATATCCAGAAGCTCTTCGTCAGTTCGTGTCATGGATGCTTCAGCCCCAGGCTGCTGTGCGGCCCCGGATAGATGATATCATTATCCATGTTGACAAGTTGATTGCAAAGTTCTCTGAAGGTAACAGTGGGGCATGA 1047 0.4651 MGCSFSGLNALYDSVNGGGDVWINENRFRVMRQLGEGGFAYVYLVKEVLADSAAGGLANKLKHSSHLSDDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKQPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLKHMHSLDPPYAHNDVKPGNVLLTHRKGQPPLAILMDFGSARPSRRQISSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPSYPEALRQFVSWMLQPQAAVRPRIDDIIIHVDKLIAKFSEGNSGA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2147g00020 348 CDD STKc_16 27 339 - -
Gabi2147g00020 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Gabi2147g00020 348 SUPERFAMILY Protein kinase-like (PK-like) 20 333 IPR011009 -
Gabi2147g00020 348 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2147g00020 348 SMART serkin_6 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2147g00020 348 Gene3D Transferase(Phosphotransferase) domain 1 15 345 - -
Gabi2147g00020 348 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 341 - -
Gabi2147g00020 348 Pfam Protein kinase domain 65 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2147g00020 Gabi-Chr2147 172551 177632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2147g00020 33 333 EF-hand Containing Proteins AT4G04710 24.756 1.04e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Gabi2147g00020 Pkinase 5.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2147g00020 K08856 - gmx:100803659 654.44