Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2146g00001 ATGGGTTCACTTCCTAAGAGAGGATATTCTCCAACCTCTCATCATCTTAGCATGCTGCAACAAGTTGTTGGTGAAAACAAATCAACAAATTCCCTACTAATTCATAGTTACAAAAGAAGTTTCAATGGTTTTGCTGCCATGCTCACTGATCAACAAAGGGAAAAACTAAGTCAGATGGAAGGTGTAATCTCAGTTTTCCCAAGCAGAACTCTTCAAACTCATACAACAAGATCTTGGGACTTCATGGGATTTCCTCAGTCAGTCCAAAGAAGGCAAACCATTGAGAGTGATACTGTAATTGGATTCATTGACAGTGGCATTTGGCCAGAATCAGACAGTTTCAATGATCAAGGTTTTGGCTCCATTCCAAAAAAGTGGAAGGGTACTTGTGCTGGTGGCAAGAACTTCACTTGCAACAAGAAGATCATTGGAGCAAGGTTTTATGCAGAAGATTCAGCAAGAGATAATGATGGCCATGGAACCCATACAGCATCAACAGCAGCTGGAAACAATGTTTATAATGCAAGCTTTCATGGACTTGCAGAAGGTACTGCAAGAGGGGGAGTTCCATTAGCAAGAGTTGCTGTGTATCAAGTATGTACTGCTATTGGTTGCAGTGAAGATAATATCTTGGCTGCTTTTGATGATGCAATAGCGGATGGAGTTGATATTATTTCCATTTCCTTGGGAGGTGATGATCAATTGAACTTCGATGAAGATACTATTGCAATTGGATCTTTTCATGCTATGGGAAAAGGGATACTTACAGTGAATTCTGCAGGCAATGATGGTCCTGATCCAAGCACAGTTGTAAGTGTAGCACCATGGATACTAACTGTTGCAGCAAGTACAATAGATCGTCAATTCATTGACAAGGTAGTTCTTGGGAATGGGAAAACACTAACTGGGAAATCAATAAACTCTTTCACATCAAATGGTACAAAATTTCCCATTGTAACAAAACACAGTACTGCTCATGTGAAAGGAAAGATAGTTTTATGTGATGATGGTTCTAGTGATCTAGATGCATATGAGAATGGTGCTATTGGTTCCATACTAGAGACAAAGAGTAAGGGTTATACAGCTGAGATTACTCCATTTCCTTCATTGACATTGTATTCAGATGAGTACAATCTTGTGAAATCCTATACAAATTCAACAAAAGATTCAAAAGCTGCAATACTCAAGAGTGAAGTAATTGCAGATCCTATTGCACCTGATGTAGCTGAGTTTTCCTCACGTGGTCCAAATAACATAGTTCCTGAAATTTTGAAACCAGATATTAGTGCCCCTGGAGTAGATATATTGGCTGCATTTTCACCAATTGGTTCACCCTCTGACCTTCCTGGTGATAAAAGGTCTGTCAAATATAACATACTATCTGGAACATCTATGTCATGTCCTCATGTTGCCGGAATAGCTACATATTTGAAATCTTTTCACTTGGATTGGTCACCGGCGGCCATCAAATCTGCAATTATGACTTCAGCACAACCA 1497 0.3941 MGSLPKRGYSPTSHHLSMLQQVVGENKSTNSLLIHSYKRSFNGFAAMLTDQQREKLSQMEGVISVFPSRTLQTHTTRSWDFMGFPQSVQRRQTIESDTVIGFIDSGIWPESDSFNDQGFGSIPKKWKGTCAGGKNFTCNKKIIGARFYAEDSARDNDGHGTHTASTAAGNNVYNASFHGLAEGTARGGVPLARVAVYQVCTAIGCSEDNILAAFDDAIADGVDIISISLGGDDQLNFDEDTIAIGSFHAMGKGILTVNSAGNDGPDPSTVVSVAPWILTVAASTIDRQFIDKVVLGNGKTLTGKSINSFTSNGTKFPIVTKHSTAHVKGKIVLCDDGSSDLDAYENGAIGSILETKSKGYTAEITPFPSLTLYSDEYNLVKSYTNSTKDSKAAILKSEVIADPIAPDVAEFSSRGPNNIVPEILKPDISAPGVDILAAFSPIGSPSDLPGDKRSVKYNILSGTSMSCPHVAGIATYLKSFHLDWSPAAIKSAIMTSAQP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2146g00001 499 CDD Peptidases_S8_3 71 497 IPR034197 -
Gabi2146g00001 499 Pfam Subtilase family 96 497 IPR000209 GO:0006508|GO:0008236
Gabi2146g00001 499 CDD PA_subtilisin_like 293 394 - -
Gabi2146g00001 499 Pfam Peptidase inhibitor I9 9 74 IPR010259 -
Gabi2146g00001 499 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 498 IPR045051 -
Gabi2146g00001 499 SUPERFAMILY Subtilisin-like 73 498 IPR036852 GO:0004252|GO:0006508
Gabi2146g00001 499 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Gabi2146g00001 499 PRINTS Subtilisin serine protease family (S8) signature 155 168 IPR015500 -
Gabi2146g00001 499 PRINTS Subtilisin serine protease family (S8) signature 95 114 IPR015500 -
Gabi2146g00001 499 PRINTS Subtilisin serine protease family (S8) signature 461 477 IPR015500 -
Gabi2146g00001 499 Gene3D Peptidase S8/S53 domain 97 498 IPR036852 GO:0004252|GO:0006508
Gabi2146g00001 499 Gene3D - 286 401 - -
Gabi2146g00001 499 ProSitePatterns Serine proteases, subtilase family, serine active site. 462 472 IPR023828 -
Gabi2146g00001 499 ProSiteProfiles Serine proteases, subtilase domain profile. 78 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2146g00001 Gabi-Chr2146 8 1537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2146g00001 1 499 Subtilisin-like Serine Gene Family AT5G59190 57.280 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2146g00001 - - psat:127076787 627.091