Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2145g00007 ATGGAAGATCATCAGGGCCAGCATGAGCCTAATAGTCCAAGCCAAGGCTCTGAGAGGAGTGAACCTGTGAGATCAAGATGGACACCAAAACCAGAACAAATCCTCATACTTGAGTCCATCTTCAACAGTGGAATGGTGAATCCCCCAAAAGATGAAACCGTCAGAATAAGAAAGCTTCTTGAGAAATTTGGAACCGTTGGTGATGCCAACGTTTTCTATTGGTTCCAGAACCGCCGCTCCCGTTCCCGCCGCCGCCAACGGCAGTTACAGGCCAGCCTTGAGGCAAGAAACCCCATGAAGCCTCAACTTGGCGGTGCAAATCAATATCAACAACAACATCATCATCATCATCATCATCATCATCAAACCATGAACTCTGCTGCTACTGTTTCAACCATGGGTTTTGGTGCTTCATCTTTCACTAATTCTCCTTCATCTTTTCTCTCTGGTTCCTCTTCTTCATCATGTGGTGTTGGCCAAGAAGGCTTATTGGGTGGTTTTTTCTCAGCCTCTACTCAAATGGGGTTCCCTGAAATTGATCACACTTTAGCATCATCTTCATCAGTTTTGTACACTTCTGATGCTCCAAATTTGAACTACCACCACTCTGGATTTGGGGGCACAAATATTTCAGGATTCATCACAGTGTTTATCAATGGGGTTGCAACAGAAGTTCCAAGGGGCCCAATTGACATCAAAACAGTGTTTGGTGAAGATGTAATGATAGTTCATTCCTCTGGAGTGTCAGTTCCTACCAATGAGTTTGGTTTCTTGATGCAAAGCTTGCAGCATGGTGAAAGCTACTTTCTGGTTTCAAAGCAAACACAAGTTTGA 834 0.4424 MEDHQGQHEPNSPSQGSERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQLQASLEARNPMKPQLGGANQYQQQHHHHHHHHHQTMNSAATVSTMGFGASSFTNSPSSFLSGSSSSSCGVGQEGLLGGFFSASTQMGFPEIDHTLASSSSVLYTSDAPNLNYHHSGFGGTNISGFITVFINGVATEVPRGPIDIKTVFGEDVMIVHSSGVSVPTNEFGFLMQSLQHGESYFLVSKQTQV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2145g00007 277 FunFam WUSCHEL-related homeobox 11 24 91 - -
Gabi2145g00007 277 Gene3D - 24 91 - -
Gabi2145g00007 277 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 274 IPR044558 GO:0003700|GO:0048830
Gabi2145g00007 277 SUPERFAMILY Homeodomain-like 17 91 IPR009057 -
Gabi2145g00007 277 MobiDBLite consensus disorder prediction 1 29 - -
Gabi2145g00007 277 MobiDBLite consensus disorder prediction 8 22 - -
Gabi2145g00007 277 ProSiteProfiles 'Homeobox' domain profile. 20 85 IPR001356 GO:0003677
Gabi2145g00007 277 MobiDBLite consensus disorder prediction 83 126 - -
Gabi2145g00007 277 SMART HOX_1 22 89 IPR001356 GO:0003677
Gabi2145g00007 277 Pfam Homeodomain 24 84 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2145g00007 Gabi-Chr2145 225229 227044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2145g00007 10 277 Wox Gene Family AT3G03660 52.330 2.16e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi2145g00007 Homeodomain 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2145g00007 - - lang:109335690 342.428