Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2144g00003 ATGGATTCAAGTTTAGTGTGGTTGGGTCTGTTTACATTGGGAGTGGTAGGGAGTGTTTTGTGGTGGTGGAATGAGCTCTGGTACGTTGTTCCTCTTAGAATCAAGTGTTCAGCTTCTGGCACCAAGTTGCCACCAGGCCACATGGGCTTCCCTTTCATTGGAGATATGATCAGCTTCCTATGGTACTTCAAATTTCTTCGACGCCCAGATGACTTTATCAACTCTAAACGACACAAATATGGCGATGGAGAAGGCATGTTCAGGACGCACCTCTTTGGGTCACCATCCATAATTGTATACACACCACAATTGAATAAATATGTGCTTCATTCAGCGGACAAGTTCGTAGACGAATGGCCATCTGTTGAACTCATGGGCAGAACTTCCATGGGGGCTGTCCATGGGAAGTCCCACGCGCGGCTTCGCAACTTTGTCACCAATGCTATCAACCGGCCTGAGGCTCTACGCCGTATCGCTCTTCTTGTCCAACCTGGCATGGTCAATACTCTTCAATCCTGGGCACAAATGGGTAAAATCAAAGCCAAGTTTGAAACTCAAAAGCTGACATTTGAAAACATTGGAAAATTATTTGTGAGCATGGAGCCAGGTCCACATCTACATTCATTGGATAAGCTTTTTCAAGGCATACTTCCAGGAATGAGAGCCTACCCAATCAATTTGCCTGGTTTTCCTTACCACCATGCTTTTCAGTGTAGAAAGAAGCTTGAGGACTTTTTCTGGATGGAGTTAGATAAGAGAAAGAACAAACGTAGGGTTGAAAAAACTGATCTAATGGACGGATTGATGCAAATAGAAGATGATGAAGGTAACAGATTGAGTGACAGAGAAGTGGTAGACAACATTGTTTCTCTAGTGGCTGGTGGATATGTGTCTACTGCCCTTGTATCAATGTGGGCTATTTACCTTCTTGCTAAGAATCCAAATGTGCTCAGAAAGCTAAGGGAAGAGAACATGGCTTTCAAAGAGAAAAGTCCGGGGGATTTTATCACAACTGAAGATATTTCAAATTTAAAATACACAAAAAAGGTCGTTGAAGAAGCACTAAGAATGGCCAATGTTGCGGCATTTACTTTCAGAAAAGTTGACAAAGAAATTGATTACAAAGGTTATAAGATACCAAAGGGATGGAAAGTAATTGTCTTGTTTCGGTACATTCATACAAGCGCAGAGAACTTTGAGGATCCCATGTATTTTAACCCTGATAGATGGAATGAGCCTGCAAAGCCTGGAACTTACCTAGTCTTCGGCTCTGGACCAAGACTATGCCCTGGAAACACGCTTGCCAGAATTCAACTCGCACTTCTGCTTCATCACTTGTCCATAGGATATAAGTGGGAACTCCTCAACCCAAACGAAGATATAATTTATCTTTCCCATCCAGCACCTGGTGATGGGGTCGAGATTAAGTTCAGCAAATTGTAA 1443 0.4283 MDSSLVWLGLFTLGVVGSVLWWWNELWYVVPLRIKCSASGTKLPPGHMGFPFIGDMISFLWYFKFLRRPDDFINSKRHKYGDGEGMFRTHLFGSPSIIVYTPQLNKYVLHSADKFVDEWPSVELMGRTSMGAVHGKSHARLRNFVTNAINRPEALRRIALLVQPGMVNTLQSWAQMGKIKAKFETQKLTFENIGKLFVSMEPGPHLHSLDKLFQGILPGMRAYPINLPGFPYHHAFQCRKKLEDFFWMELDKRKNKRRVEKTDLMDGLMQIEDDEGNRLSDREVVDNIVSLVAGGYVSTALVSMWAIYLLAKNPNVLRKLREENMAFKEKSPGDFITTEDISNLKYTKKVVEEALRMANVAAFTFRKVDKEIDYKGYKIPKGWKVIVLFRYIHTSAENFEDPMYFNPDRWNEPAKPGTYLVFGSGPRLCPGNTLARIQLALLLHHLSIGYKWELLNPNEDIIYLSHPAPGDGVEIKFSKL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2144g00003 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Gabi2144g00003 480 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PANTHER CYTOCHROME P450 26 42 465 - -
Gabi2144g00003 480 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 SUPERFAMILY Cytochrome P450 40 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 Pfam Cytochrome P450 57 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2144g00003 480 Gene3D Cytochrome P450 34 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2144g00003 Gabi-Chr2144 12892 18188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2144g00003 5 479 Cytochrome P450 AT2G32440 34.979 5.45e-98 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2144g00003 - - vvo:131636230 748.429