Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2140g00001 ATGGCTGCAGCTTTTGTGGGAGAAGCATTCCTCTCAGCTTCTGTGGAGGTGCTGTTAGACAGGTTCATTTCCCTTGAGTTCCTAGATTTCTTTCATAGCAAGGAGCTTGATGTCTCACTCCTTAAAAAGCTGAAAATATCACTGTTGAGTCTTCAAGCTGTATTAAATGATGCTGAAGAGAAACAGATTACTAATCCTGCAGTCAAGGAATGGCTACAAGAGCTCACACATGCTGTCTTTGATGCTGATGATTTGTTGGATGAAATCAACACTGAGGCTTTGCGATGCAAACTGGAAGCTGAGTCTCAAAGTCAAACCATTAGTGATCAGGTGCGGAACTTCCTTTCTTCTCCTTTCAAACGGTTTTCAGGGTTGATCCATTCAAAAATACTAGCATTGTTTCAGAGGTTAGAACAATTTGCACTGCAAAAAGACATCCTTCAACTGAAAGGCAGTGTTTGGCATGGAACTCCTACAAGTAGTGTGGTAGATGAATCTTCTATTTATGGAAGAGATGATGAGAAAAACAGACTTAAAGATTATCTACTTTCACAAGATGCCGGTGACTGTAAAATAGGAGTGATTTCCATTGTGGATGGAGGGCCTGGTAAAACAACCCTCGCTAAACTCCTTTACAACGATGATAGAGTGAAAGAGAAATTTGATCTAAAAGCGTGGGCATATATTTCAAAAGATTTTGATGTTTGCAGGGTTACTAAAACCATTCTTGAATCTGTCACTTTAAAACCAGCAAATACAGATAACCTGAATATTCTTCAAGTGAAATTGCAGCAAAGCTTAAGCCATAAAAGATTTTTGCTTGTATTGGACGACATATGGGATGGGAACTATGTTGATTGGAACAATTTAATGGAAATTTTTAGTGCTGCGGAAATGGGAAGTAAGATCATCATCACAACACGAGATGAAAGTTTTGCTAAAGCCATGCAAACCTCTTTTCCTATCTACCATCTGACATCTCTGGCTGTTGAAGATTGCTGGTCTTTACTTGCTAAACATGCATTTGGAGCAAATAATTGCAGCAGAGTGTCCAACCTAGAAGTAATTGGTAAAGAAATTGCTAAAAAATGTGATGGCTTACCATTAGCTGCAGTGGCACTTGCGGGTCTCCTTCGCACCAATTTATCAGAAAATTACTGGAACAAGGTATTAAAAAGTAACATTTGGGATTTGCCGAATGTTAAGGTGCTACCAGCTCTTCTGTTGAGCTATCATTATCTCCCTGCTCCTTTAAAACAATACTTTGCTTATTGTTCAATTTTTCCAAAGAACTCCGAGTTAGAAAAAAAGAGGGTAGTTCAGCTATGGATTGCAGAAGGCTTAGTACATCAGCCTAGAAGTGAGAAAACCATGGAAGAAGTAGGTGATGAATACTTTGATGAACTCGTATCAAGGTCATTGATACTTCGAGGGTCATTGAATGAGCAAGCAGACTTTAAGATGCATGACCTCGTTAATGATTTAGCCACAATGATTTCATCTTCATATTGTATCAGGTACGAGCATCCAAAGTCACCTAAAAGTGTTGAAAGAGTTCGTCATTTGTCATACAACAAAGGGAGCTATGACTCTTTCAACAAATTTGATTGCTTTTATCAATCAAAAGGTCTACGTACGTTCATAGGCTTACCATTAAATCTAGGATGGTGGTTAAAAAGTGGTCATTTTGCATCCCATTACTTATCAAACAAGGTGGTTCATGACTTGTTACCAGCAATGAAACAGTTACGGGTGTTGTCCTTGTCACACTATTATAATATCACTGAGCTTCCTGACCATATTGGAAATTTAATTCACCTGCGATACTTAGATCTTTCTAACACTAAAATTCAAAGGTTACCAGAAGCAACATGCAAGCTCTACAATCTGCAGACCTTGTTGTTGTCCAAATGTTGGTCACTCGCTGAATTGCCTGAGGACATGGGAAATTTGGTTAATCTACGACACCTTGACATTAGTGGCACTAAATTGAAGAAGATGCCTGCACAAATAGCCAGACTACAAAATCTTCAAACCTTGTCTGCTTTTGTTGTCAGCAAACTGCAGGATGGATTGAAGGTTGGAGAGTTAAAAAAAATTCCCCATCTAAAGGGGAAACTTTGCATTTCAAAGCTACAAAATGTAATTGACCCATGTGAGGCTTTTCAAGCCAATTTGAGGAAAAAAGAACTAATAGACGAGTTGGCATTGGAATGGGATTGTGGTACTACGGAAGACACACAAATTGAAAGGCTTGTACTTGAACAGCTGCAGCCTCCAACAAATTTGAAGAAGCTGACCATTAAATTCTATGGTGGAACCAGCTTTCCAAGTTGGTTGGGTGATTCCTCATTTGGTAACATGGTGTACTTGTGCATCAGTGGTTGTGATCATTGTTGGTCACTGCCACCCCTTGGACAATTGCCTCATCTCCAAGAACTCTTCATTTCTGGGATGAAGTCTGTGAAGACCGTTGGTACTGAATTTTACGGAAGTTGTTCCCCTTCATTTCAGTCATTTCCCTCCTTGGAGATTCTGAGCTTTGAGAACATGCCAGGGTGGGAGGAATGGAACTTGATTGGAGGTACAGCTATAGAGTTTCCTAGTCTATCACATCTATCTCTGAAGGATTGTCCCAAACTCAAAGGAACCTTACTCAACAAACTTCCTTCCTCAACATTTTTTTATTTCTCAAACTGTTCTTTCTTGTTGCCAGTGTTCTGTCCCAAACTCATAGAAAACTTACCAAGAAACCTTCATCCCTCAATTGTGCTTAAGTGCACTAATTTCATTGTAGACTTAACTATCTCCGGCATTCCATCACCGGCATCCCTCCCAGTAGATGGTCTTCCCACAGTGTTGCGATTTCTCACTTTATACAATTGTGAGAAACTGGAATTCCTTCCTCATGAATCCTTGTGCAATTACACATCACTTGAGGAGTTGGAAATTCGCAATAGCTGTTATTCACTGGCATCATTCACCTTAGGCTGTCTTCCTGTGCTCAAAAGTCTTAGCATTATGAGTTGTAAAAGTCTAAAATCAATTCTGATTGAAGAAAATGCTTTCCAGAGTCTCTCACATCTTCAACGTTTGAGTATATGTGATTGTCCTGAACTAGAGTCATTTCCTGTGAATTGTGTCAAGCTTACTTCACTGCCTGAACCAATTAACACTCTTGCTGCTCTTCGAGGATTGAATATTGATAGCCTTCCAAATCTTGAGTCTTTTGCAAAAGAAGGTTTGCCTATCAATTTACGCATGTTTATTGTCTGTAGTCTTGGGAGTTCCTGGACTACAGCTATCAGTGAGTGGGGTTTGCAACGACTCACTTGTCTTTCAGAGTTGTATATTGGAGGTGATGATCTTTCAAACGCGCTAATGAAAATGAAAGTGCCATTGCTGCCTACTTCTCTTGTGTCCCTAGTCATCTACAATCTTTGTGATATAAAATGCTTGGATGGGAAGTGGCTTCAGCATCTCACCTCTCTTGAAGAACTTGAAATTTCATCCTGTCACCGACTTGAATCTTTGCCTGAAGAGGGACTGCCTTCCTCTCTATCACTATTAACCATCAACAGCTGTCCATTATTAGAAGCAAGTTGTCATAGCAATGGAGGGAAAGAGTGGCCTAAGATTGCTCACATTCCATGCATAGTTATCAATAGGCAAGTGTTCATATGA 3684 0.3974 MAAAFVGEAFLSASVEVLLDRFISLEFLDFFHSKELDVSLLKKLKISLLSLQAVLNDAEEKQITNPAVKEWLQELTHAVFDADDLLDEINTEALRCKLEAESQSQTISDQVRNFLSSPFKRFSGLIHSKILALFQRLEQFALQKDILQLKEXSVWHGTPTSSVVDESSIYGRDDEKNRLKDYLLSQDAGDCKIGVISIVGXGGPGKTTLAKLLYNDDRVKEKFDLKAWAYISKDFDVCRVTKTILESVTLKPANTDNLNILQVKLQQSLSHKRFLLVLDDIWDGNYVDWNNLMEIFSAAEMGSKIIITTRDESFAKAMQTSFPIYHLTSLAVEDCWSLLAKHAFGANNCSRVSNLEVIGKEIAKKCDGLPLAAVALAGLLRTNLSENYWNKVLKSNIWDLPNVKVLPALLLSYHYLPAPLKQYFAYCSIFPKNSELEKKRVVQLWIAEGLVHQPRSEKTMEEVGDEYFDELVSRSLILRGSLNEQADFKMHDLVNDLATMISSSYCIRYEHPKSPKSVERVRHLSYNKGSYDSFNKFDCFYQSKGLRTFIGLPLNLGWWLKSGHFASHYLSNKVVHDLLPAMKQLRVLSLSHYYNITELPDHIGNLIHLRYLDLSNTKIQRLPEATCKLYNLQTLLLSKCWSLAELPEDMGNLVNLRHLDISGTKLKKMPAQIARLQNLQTLSAFVVSKLQDGLKVGELKKIPHLKGKLCISKLQNVIDPCEAFQANLRKKELIDELALEWDCGTTEDTQIERLVLEQLQPPTNLKKLTIKFYGGTSFPSWLGDSSFGNMVYLCISGCDHCWSLPPLGQLPHLQELFISGMKSVKTVGTEFYGSCSPSFQSFPSLEILSFENMPGWEEWNLIGGTAIEFPSLSHLSLKDCPKLKGTLLNKLPSSTFFYFSNCSFLLPVFCPKLIENLPRNLHPSIVLKCTNFIVDLTISGIPSPASLPVDGLPTVLRFLTLYNCEKLEFLPHESLCNYTSLEELEIRNSCYSLASFTLGCLPVLKSLSIMSCKSLKSILIEENAFQSLSHLQRLSICDCPELESFPVNCVKLTSLPEPINTLAALRGLNIDSLPNLESFAKEGLPINLRMFIVCSLGSSWTTAISEWGLQRLTCLSELYIGGDDLSNALMKMKVPLLPTSLVSLVIYNLCDIKCLDGKWLQHLTSLEELEISSCHRLESLPEEGLPSSLSLLTINSCPLLEASCHSNGGKEWPKIAHIPCIVINRQVFI 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2140g00001 1229 Gene3D - 37 130 - -
Gabi2140g00001 1229 Gene3D Ribonuclease Inhibitor 1049 1218 IPR032675 -
Gabi2140g00001 1229 FunFam Probable disease resistance protein At1g61300 156 322 - -
Gabi2140g00001 1229 Coils Coil 41 61 - -
Gabi2140g00001 1229 Gene3D - 154 324 IPR027417 -
Gabi2140g00001 1229 Gene3D - 412 500 IPR036388 -
Gabi2140g00001 1229 Gene3D Ribonuclease Inhibitor 918 1048 IPR032675 -
Gabi2140g00001 1229 SUPERFAMILY L domain-like 931 1216 - -
Gabi2140g00001 1229 Gene3D Ribonuclease Inhibitor 561 917 IPR032675 -
Gabi2140g00001 1229 SMART LRR_typ_2 653 676 IPR003591 -
Gabi2140g00001 1229 SMART LRR_typ_2 606 629 IPR003591 -
Gabi2140g00001 1229 SMART LRR_typ_2 1163 1187 IPR003591 -
Gabi2140g00001 1229 Gene3D - 329 411 IPR042197 -
Gabi2140g00001 1229 SUPERFAMILY L domain-like 489 906 - -
Gabi2140g00001 1229 Pfam NB-ARC domain 173 394 IPR002182 GO:0043531
Gabi2140g00001 1229 PRINTS Disease resistance protein signature 604 620 - -
Gabi2140g00001 1229 PRINTS Disease resistance protein signature 366 380 - -
Gabi2140g00001 1229 PRINTS Disease resistance protein signature 268 282 - -
Gabi2140g00001 1229 PRINTS Disease resistance protein signature 195 210 - -
Gabi2140g00001 1229 PANTHER DISEASE RESISTANCE PROTEIN RP 36 880 IPR044974 GO:0006952
Gabi2140g00001 1229 FunFam Probable disease resistance protein At1g63360 413 500 - -
Gabi2140g00001 1229 Pfam Rx N-terminal domain 39 103 IPR041118 -
Gabi2140g00001 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2140g00001 Gabi-Chr2140 6675 10405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2140g00001 193 922 WRKY Transcription Factor Family AT5G45050 23.907 2.18e-10 63.5