Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi213g00001 ATGGCCAAGCATAACTCTGCTATCTTTTATGCCTCTTATGTCACTTTCATTCTAGCATGTATATTTTCCCTATCCTATGAAGCTGTTGCTGAAAATCCAAAACCTCATATTGTGTATATGGGTTCACTTCCTAAGAGAGCATATTCTCCAACCTCTCATCATCTTAGCATGCTGCAACAAGTTGTTGGTGTAAACAAATCAACAAATTCCCTACTAATTCATAGTTACAAAAGAAGTTTCAATGGTTTTGCTGCCATGCTTACTGATCAACAAAGGGAAAAACTAATTCAGATGGAAGGTGTAATCTCAGTTTTTCCAAGCAGAACTCTTCAAACTCATACAACAAGATCTTGGGACTTCATGGGATTTCCTCAGTCAGTCCAAAGAAGGCAAACCATTGAGAGTGATACTGTAATTGGATTCATTGACACTGGCATTTGGCCAGAATCAGACAGTTTCAATGATAAAGGTTTTGGCCCCATTCCAAAAAAGTGGAAGGGTACTTGTGCAGGTGGCAAGAAATTCACTTGCAACAAGAAGATCATTGGAGCAAGGTTTTATGTAGAAGATTCAGCAAGAGATAATGAAGGCCATGGAACCCATGCAGCATCAACAGCAGCAGGAAACAATGTTTATAATGCAAGCTTTTATGGACTTGCAGAAGGTACTGCAAGAGGGGGAGTTCCATTAGCAAGAGTTGCTATGTATAAAGTATGTTCTGAAATTGGTTGCAGTGAAGATAGTATCTTGGCTGCTTTTGATGATGCAATAGCAGATGGAGTTGATATCATTTCCATTTCCTTGGGAGGTGATGATCAATTGAACTTCGATGAAGATAGTATTGCAATTGGATCTTTTCATGCTATGGGAAAAGGGATACTTACAGTGAATTCTGCAGGCAATGATGGTCCTGATCCAAGCACAGTTGTAAGTGTAGCACCATGGATACTAACTGTTGCAGCAAGTACAATAGATCGTCAATTCATTGACAAGGTAGTTCTTGGGAATGGGAAAACACTAACTGGGAAATCAATAAACTCTTTCACATCAAATGGTACAAAATTTCCCATTGTAACAGAACACAGTACTGTTCATGTGAAAGGAAAGATAGTTTTATGTGATGTTGGTTCTAGTGATGAAGGTGCATATGAGAACGGTGCAATTGGTGCAATACGAGGGACATGGAGAAGGGGTTATACAGCTCATATTACTCCATTTCCTTCACTGACATTGTATTCAGATGAGTACAATCTTGTGAAATCCTATACAAATTCAACAAAAGATTCAAAAGCTGAAATACTCAAGAGTGAAGTAATTGCAGATCCTATTGCACCTGATGTAGCTGAGTTTTCCTCACGTGGTCCAAATAACATAGTTTCTGAAATTTTGAAACCAGATATTAGTGCCCCTGGAGTAGATATATTGGCTGCATTTTCACCAATTGGTTCACCCTCTACCCTTCCTGGTGATAAAAGGTCTGTCAAATATAACATACTATCTGGAACATCTATGTCATGTCCTCATGTTGCCGGAATAGCTACATATTTGAAATCTTTTCACTTGGATTGGTCACCCGCAGCCATCAAATCTGCAATTATGACTTCAGCACAACCAATGAAGAGTAATTCTAAGGATTATATTGGTGAGTATGCTTATGGATCTGGGCATATCAATCCTGTTCAAGCTATTAATCCTGGACTTATTTATGACATTGGTAAGGAAGATTATATACAAATGCTTTGCAACTTGGGATATGATAATAACAAAATTAAACAGATATCTGGTGAAAATAGTCCTTGCATTGGAGCTCCTAATAGATCATTGGTAAGAAATCTGAATTATCCATCACTTGCGGTGGATGTTCGGGTGAATGTATCTTTCCATGTTACGTTCAATAGGACAGTAACAAATGTTGGGTTGGCTAATTCGATTTACAGGGCAACTATCTTACCAAACCCCACAGTCAACATTACGGTGGCACCAGAGATTCTGTCCTTCAAATCATTGAATGAGAAGCAATCTTTTGTTGTTGCCATTGTTGGTAATGAATTACATAGTCAAAGTGTGCTCACCTCGTCATTGACATGGTCAGATGGCACCCATAATGTACGGAGTCCAATTGTTGTGAATGTGTCCTAG 2139 0.3866 MAKHNSAIFYASYVTFILACIFSLSYEAVAENPKPHIVYMGSLPKRAYSPTSHHLSMLQQVVGVNKSTNSLLIHSYKRSFNGFAAMLTDQQREKLIQMEGVISVFPSRTLQTHTTRSWDFMGFPQSVQRRQTIESDTVIGFIDTGIWPESDSFNDKGFGPIPKKWKGTCAGGKKFTCNKKIIGARFYVEDSARDNEGHGTHAASTAAGNNVYNASFYGLAEGTARGGVPLARVAMYKVCSEIGCSEDSILAAFDDAIADGVDIISISLGGDDQLNFDEDSIAIGSFHAMGKGILTVNSAGNDGPDPSTVVSVAPWILTVAASTIDRQFIDKVVLGNGKTLTGKSINSFTSNGTKFPIVTEHSTVHVKGKIVLCDVGSSDEGAYENGAIGAIRGTWRRGYTAHITPFPSLTLYSDEYNLVKSYTNSTKDSKAEILKSEVIADPIAPDVAEFSSRGPNNIVSEILKPDISAPGVDILAAFSPIGSPSTLPGDKRSVKYNILSGTSMSCPHVAGIATYLKSFHLDWSPAAIKSAIMTSAQPMKSNSKDYIGEYAYGSGHINPVQAINPGLIYDIGKEDYIQMLCNLGYDNNKIKQISGENSPCIGAPNRSLVRNLNYPSLAVDVRVNVSFHVTFNRTVTNVGLANSIYRATILPNPTVNITVAPEILSFKSLNEKQSFVVAIVGNELHSQSVLTSSLTWSDGTHNVRSPIVVNVS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi213g00001 712 Gene3D Peptidase S8/S53 domain 136 576 IPR036852 GO:0004252|GO:0006508
Gabi213g00001 712 Gene3D - 580 711 - -
Gabi213g00001 712 ProSiteProfiles Serine proteases, subtilase domain profile. 117 563 - -
Gabi213g00001 712 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Gabi213g00001 712 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
Gabi213g00001 712 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Gabi213g00001 712 Pfam Peptidase inhibitor I9 36 113 IPR010259 -
Gabi213g00001 712 FunFam Subtilisin-like protease SBT1.5 136 336 - -
Gabi213g00001 712 FunFam Subtilisin-like protease SBT1.5 580 712 - -
Gabi213g00001 712 CDD Peptidases_S8_3 110 536 IPR034197 -
Gabi213g00001 712 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Gabi213g00001 712 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 709 IPR045051 -
Gabi213g00001 712 CDD PA_subtilisin_like 332 433 - -
Gabi213g00001 712 FunFam Subtilisin-like protease SBT5.3 25 113 - -
Gabi213g00001 712 ProSitePatterns Serine proteases, subtilase family, serine active site. 501 511 IPR023828 -
Gabi213g00001 712 Gene3D - 325 440 - -
Gabi213g00001 712 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Gabi213g00001 712 Pfam Subtilase family 135 552 IPR000209 GO:0006508|GO:0008236
Gabi213g00001 712 Pfam Fibronectin type-III domain 611 709 IPR041469 -
Gabi213g00001 712 SUPERFAMILY Subtilisin-like 112 567 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi213g00001 Gabi-Chr213 10959 13097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi213g00001 36 709 Subtilisin-like Serine Gene Family AT5G59100 53.182 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi213g00001 - - psat:127076787 848.58