Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2134g00001 ATGGAGACGCACGGCGGAGGAACCCTCCGTTCCCGCAGCTCTCAGTCCCCTTCACCTTCCCACTCCGCTTCCGCCTCCGCCACCTCTTCCATCCGCAAGCGCAAGCTCGCGTCTGATGACCACGCGCCTCCCTTTCCCCCTTCTTCCTTCTCCGCCGACACGCGCGACGGCGCCCTCACCTCCAATGACGACCTCGAGAGCGTCTCCGCCCGCGGCGCCGACTCCGACTCCGAGGACGACTACGACAACGACAACGACAACGATTCCTCCATGCGCACCTTCACCGCTGCAAGGCTCAGCAACCCTCCCTCCGCGCCACGCAACACCAAGCTCAAGACCGATAATTCCAACGTTAAGATCGAGAATTCCGATGGCGCCAAAGACGCCGCACCCGCCGGGGCTGGTGCCGTCGGCGCCGCCGCCACCGGCAGCTCCGTCCCCGGCATCGTGGTTAAGGAGGACGCAACTAAGATATTCACTGATAATTTACAAACTAGTGGTGCTTACAGCGCTAGGGAAGAGAGTCTCAGGAAAGAGGAGGAAGCAGGAAGGCTCAAATTCGTATGCTGTTCGAATGATGGCATTGATGAACATATGATTTGGTTGATAGGATTGAAGAATATATTTGGTAAGCAACTTCCAAATATGCCCAAGGAGTACATTGTCCAACTTGTTATGGATAGGAGTCATAAGTCTGTAATGGTCATAAGGCGTAATCATGTTGTTGGAGGCATTACATATCGCCCATATGCAAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAAGGTTATGGTACCAGATTGATGAATCACTTAAAACAGCATGCACGTGATAAAGATGGGTTGACACATTTTCTCACATATGCTGACAATCATGCTGTTGGCTATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGGGGGATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCTTACACTGAATTGTCACCTATGTTCCGTCGTCAAAGGCAGGCAATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCACATTGTTTATACTGGAATTGATTTTCAGAAGAAAGAAGCTGGTATTCCCAAAAAAATTATTGAGGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAACTGTAAGTGGTTCCACTGACAGTTTGACCGCGTTTATGCGTTCCCTTCTAAAGTCAATGCACGATCATGCTGATGCTTGGCCGTTCAAGGAACCAGTTGATGCACGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAGTGGATTTGAAGACAATGACTAAGAGGGTGGAGTCAGAGCAATATTATGTCACATTTGAGATGTTTCTTGCGGATGTCAGAAGAATGTTTGCGAATGCACGCACTTATAATTCTCCAGAAACCATTTATTACAAATGTTCTACAAGGCTTGAAGCTCACTTTCAATTGGTTGGTGGCCTTCTCCCTGGTCATGGTAATGATTGGCCACTTTATTATAAAGTTCTTTTTGCTTGA 1611 0.4767 METHGGGTLRSRSSQSPSPSHSASASATSSIRKRKLASDDHAPPFPPSSFSADTRDGALTSNDDLESVSARGADSDSEDDYDNDNDNDSSMRTFTAARLSNPPSAPRNTKLKTDNSNVKIENSDGAKDAAPAGAGAVGAAATGSSVPGIVVKEDATKIFTDNLQTSGAYSAREESLRKEEEAGRLKFVCCSNDGIDEHMIWLIGLKNIFGKQLPNMPKEYIVQLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDKDGLTHFLTYADNHAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTELSPMFRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKIIEDIPGLREAGWTPDQWGHSRFRTVSGSTDSLTAFMRSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPVDLKTMTKRVESEQYYVTFEMFLADVRRMFANARTYNSPETIYYKCSTRLEAHFQLVGGLLPGHGNDWPLYYKVLFA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2134g00001 536 PANTHER GH11602P 49 514 IPR037800 GO:0004402
Gabi2134g00001 536 SMART bromo_6 413 522 IPR001487 GO:0005515
Gabi2134g00001 536 MobiDBLite consensus disorder prediction 1 32 - -
Gabi2134g00001 536 FunFam Histone acetyltransferase KAT2A 182 346 - -
Gabi2134g00001 536 CDD Bromo_gcn5_like 419 513 - -
Gabi2134g00001 536 ProSitePatterns Bromodomain signature. 437 495 IPR018359 -
Gabi2134g00001 536 PRINTS Bromodomain signature 449 465 IPR001487 GO:0005515
Gabi2134g00001 536 PRINTS Bromodomain signature 484 503 IPR001487 GO:0005515
Gabi2134g00001 536 PRINTS Bromodomain signature 435 448 IPR001487 GO:0005515
Gabi2134g00001 536 ProSiteProfiles Bromodomain profile. 432 503 IPR001487 GO:0005515
Gabi2134g00001 536 Pfam Bromodomain 425 507 IPR001487 GO:0005515
Gabi2134g00001 536 Pfam Acetyltransferase (GNAT) family 232 310 IPR000182 GO:0016747
Gabi2134g00001 536 SUPERFAMILY Bromodomain 403 514 IPR036427 GO:0005515
Gabi2134g00001 536 MobiDBLite consensus disorder prediction 53 68 - -
Gabi2134g00001 536 Gene3D - 411 516 IPR036427 GO:0005515
Gabi2134g00001 536 MobiDBLite consensus disorder prediction 1 132 - -
Gabi2134g00001 536 MobiDBLite consensus disorder prediction 88 122 - -
Gabi2134g00001 536 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 201 340 IPR016181 -
Gabi2134g00001 536 CDD NAT_SF 232 287 - -
Gabi2134g00001 536 Gene3D - 181 345 - -
Gabi2134g00001 536 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 193 339 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2134g00001 Gabi-Chr2134 10219 22275 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi2134g00001 Bromodomain 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2134g00001 K06062 - gmx:100813942 853.973