Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2132g00001 GTAGAAATTCTCATTCGTGATTTCTTTGAAGGTTATACGAAAGGAAGAACATATATGAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCCTCTGACAAGTTTGAAGATCTTTTGCCCCGACATTGTGATGAATTTATCCGTTGTTTACCATTTCAAGAGTACAGTGATCCTCGAGCTGGAATCCTCAACCTTGCTGCAAAGTTACCAGCTCATGTCCTAAAGCCTGACATGGGTCCTAAAACCTATATTGCATATGGGACTAAAGAAGAACTTGGCAGAGGGGACTCTGTAACAAAGCTTCACTGTGATATGTCTGATGCGGTGAATATTTTGACTCATACAGCTGAGGTTACATTAACTGATGAACAGCACCCTGTTATTTCAAAATTAAAGAAAGCACACAAGGCCCAAGATGAGAAAGAGTGTCATGCTCAGGTTGCTGAATGCCAGAAGAAGTGCCATAAAGTCAATGGAAAGATATTTCCAAATGATGTGCCTGCTATCTCTAAAGAAACAACAGAAACAGGTGGTGCTCTTTGGGACATCTTTCGGAGGGAGGATACTGAAAAGTTAGAAGCATATCTACGAAAACATTCTAAAGAATTTAGACATACTTATTGTTGTCCAGTTCAAAAGGTTGTCCATCCAATTCATGACCAATGTTTTTATTTGACTTTGGAGCACAAGAAGAAGCTGAAGGAAGAATTTGGTGTAGAACCTTGGACGTTTGAGCAGAAACTTGGAGAGGCAGTATTTATTCCTGCTGGATGTCCACACCAAGTTAGGAATCTCAAGTCATGCACTAAAGTTGCTTCAGATTTTGTGTCTCCTGAGAATATTCATATGTGCTTGCGATTAAAGGATGAATTTCGTCGTCTTCCTAGGAATCACAAGGCGAGGGAAGATAAGCTAGAGATAAAGAAGATGATCGTGCATGCTGTAGATCAAATAGTCAAGGAATTAGAAGCATTGGTGGAGTGTTCTTGA 996 0.4046 VEILIRDFFEGYTKGRTYMNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRCLPFQEYSDPRAGILNLAAKLPAHVLKPDMGPKTYIAYGTKEELGRGDSVTKLHCDMSDAVNILTHTAEVTLTDEQHPVISKLKKAHKAQDEKECHAQVAECQKKCHKVNGKIFPNDVPAISKETTETGGALWDIFRREDTEKLEAYLRKHSKEFRHTYCCPVQKVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVASDFVSPENIHMCLRLKDEFRRLPRNHKAREDKLEIKKMIVHAVDQIVKELEALVECS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2132g00001 331 SMART cupin_9 41 294 IPR003347 -
Gabi2132g00001 331 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 328 IPR045109 GO:0032454|GO:0033169
Gabi2132g00001 331 Pfam JmjC domain, hydroxylase 179 277 IPR003347 -
Gabi2132g00001 331 ProSiteProfiles JmjC domain profile. 60 294 IPR003347 -
Gabi2132g00001 331 FunFam Transcription factor jumonji (JmjC) domain-containing protein 114 303 - -
Gabi2132g00001 331 Gene3D Cupin 1 303 - -
Gabi2132g00001 331 SUPERFAMILY Clavaminate synthase-like 12 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2132g00001 Gabi-Chr2132 128 2118 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gabi2132g00001 JmjC 1.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2132g00001 K15601 - gmx:100801772 577.4