Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2129g00025 ATGTTGAATCTATTGAGAGAAGATTTAGTATTCTTAGTGCAGAACTATTATGACATAATCGTGGTTGCTTTACTCTCTATCGGAGTAGCATATTTCATTCCAAAAGCTTGGAAAAGAACTAGAAACAATGGAGAAGATATCCCTGGTCGGCTGGGATTACCTTTTATTGGGGAAACTTTTTCTTTTCTTTCAGCCACTAATAGTACAAGAGGATGCTATGATTTTATCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAAGACAAGGCTATTCGGCAAGATCCACATATTTGTTCCTAATAGTGAAGGTGCAAGGACGGTATTTGCTAATGACTTCGTTCTATTCAACAAGGGTTATCTGAAATCAATGGCAGATGCTGTGGGAAAGAAAAGCTTATTATGTGTACCAGTTGAGAGCCACAAAAGAATAAGGCGTCTTCTATCTGAACCATTCTCTTTGACTTCCCTATCTGCATTTGTCTCAAAATTTGACAAAATGTTGTGTGGAAGGCTGCAAAAGCTAGAAGAAAGTGGGAAAAGTTTCAAGGTGCTTGACTTCAGTATGAAGATGACATTTGATGCAATGTGTGATATGCTGATGAGTATCACGGAGGATTCATTACTACAACAGATCGAGAAAGATTGCACTGCTGTCTCTGATGCCATGCTGTCCTTTCCTATCATGATTCCTGGAACCAGATACTATAAAGGCATAATGGCTCGTAGAAGGCTCATGGAAACATTCAGAGAAATCATTGCCAGACGAAGGAGGGGAGATGAGTCTCCAGGGGACTTCCTACAGTCCATGTTGCAGAGAGATTCATTCCCAGCCAGTGAAAAGCTTGATGACTCAGAGATAATGGATAACCTGTTGACAATGATAATTGCTGGACAGAGCACAACATCAGCAGCAATGATGTGGAGTGTAAAGTTTCTACATGACAACAGAGAAGCACTGGACATACTCAGGGAAGAACAATTGTCATTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAACCATGAGGATCTCAACAAGATGCGTTATTGTTTGAAGGTAGTAAAGGAAACACTGAGAATGTCCAATGTCCTGTTGTGGTTTCCTCGTGTTGCACTTCAAGACTGCAAAATTGAAGACCTTAAATTGAAGGGGCTTTGTTTATCATTAGTCTTTTTGGCTTCCATGACTATGTTGTTAACTATACGAGTGGCAATGACAGGGTATGATATAAAGAAAGGTTGGCACGTTAACATTGATGCAACTTTTGTCCATTATGACTCAGATTTGTACAAGGATCCGTTGAAATTCAACCCGCAAAGATTTGATGAAATGCAAAAGCCCTATAGTTTCATGCCTTTTGGATCAGGGCCTAGGACATGCCTAGGGATCAATATGGCGAAAGTGACAATGTTGGTCTTTTTACACAGAGTCACAAGTGGTTACACGTGGACCCTAGATGATTTGGATACATGCTTAGAAAAGAGTGCACACATACCTAGACTAAGAAGTGGCTGTCCAATAACGTTGAAGTCCTTAAGCAAAAGCATGCCAGAGGCATAA 1563 0.4044 MLNLLREDLVFLVQNYYDIIVVALLSIGVAYFIPKAWKRTRNNGEDIPGRLGLPFIGETFSFLSATNSTRGCYDFIRLRRLWNGRWFKTRLFGKIHIFVPNSEGARTVFANDFVLFNKGYLKSMADAVGKKSLLCVPVESHKRIRRLLSEPFSLTSLSAFVSKFDKMLCGRLQKLEESGKSFKVLDFSMKMTFDAMCDMLMSITEDSLLQQIEKDCTAVSDAMLSFPIMIPGTRYYKGIMARRRLMETFREIIARRRRGDESPGDFLQSMLQRDSFPASEKLDDSEIMDNLLTMIIAGQSTTSAAMMWSVKFLHDNREALDILREEQLSLTKMKPEGASLNHEDLNKMRYCLKVVKETLRMSNVLLWFPRVALQDCKIEDLKLKGLCLSLVFLASMTMLLTIRVAMTGYDIKKGWHVNIDATFVHYDSDLYKDPLKFNPQRFDEMQKPYSFMPFGSGPRTCLGINMAKVTMLVFLHRVTSGYTWTLDDLDTCLEKSAHIPRLRSGCPITLKSLSKSMPEA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2129g00025 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Gabi2129g00025 520 PANTHER CYTOCHROME P450 26 48 485 - -
Gabi2129g00025 520 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 Gene3D Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 SUPERFAMILY Cytochrome P450 37 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 Pfam Cytochrome P450 53 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 Pfam Cytochrome P450 405 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2129g00025 520 CDD CYP90-like 77 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2129g00025 Gabi-Chr2129 177183 181022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2129g00025 19 482 Cytochrome P450 AT1G19630 42.217 4.70e-122 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2129g00025 - - gsj:114390394 896.73