Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2129g00018 ATGGAGTTTGCTGGTTTCCATCTTCAGCATCAGCTCCAAGAAGAGTTTGATCAGTGTGTAACTTCAGCCACCCCACATGACTATAAACCTTCCACTACTCAATCATGGATTCCAAGCAACATATATAATGGTTGTACCAATGGGTTTATGACTGAGAACTTCACAAATTCAAGAGAACAAGGACACAAGTATGACATGACTGATTCACTCAGAACTTCAACAGGGCAAGACTTTGGTTTCCACAATGGAAAAAGCTTCACTCAACAGCAAGCCTATGATCTCTTAGTTTCTTCTCCTAGTCGTCATGTAAATGAAAAAGAATTTTCGCCTTCAGAGAATCTCTATCATCTTCAGAAGCCTATAAATGAAGGGATGGCCCTAACCAAGAGCTATAACTTTGGCCATATTTCATCATTCACAAGGGAAGTTGCAATGACGAAAAGGCCTAGCAAATGCTCTCGATCACAAGAATCTGAAGCGAAAGCTAAGAAGTCAAGGCCTTCATGCCCTCCTTTGAAGGTCAGAAAGGAAAATTTGGGAGACAGAATCCAAACTCTTCAGAGGTTAGTGGCACCTTTCGGGAAGACCAGTACAGTCTCTGTATTAACTGAAGCCATTGGTTACACCCACGTCCTTCATGAACAAATCCAGACTTTGAGTATTCCTTACATGAAGTTCGCACAAAGCAAGTCCTCTAGAATAGTGCAGCTGGATTCAAAAAAGGTAGATAGCAGAGAATTCAAGCCAGACCTTAGAAGCAGAGGCTTGTGTCTTGTGCCGCTTTCTTTCGCATCATCTATTAATCGTTGGGCTTAG 816 0.4191 MEFAGFHLQHQLQEEFDQCVTSATPHDYKPSTTQSWIPSNIYNGCTNGFMTENFTNSREQGHKYDMTDSLRTSTGQDFGFHNGKSFTQQQAYDLLVSSPSRHVNEKEFSPSENLYHLQKPINEGMALTKSYNFGHISSFTREVAMTKRPSKCSRSQESEAKAKKSRPSCPPLKVRKENLGDRIQTLQRLVAPFGKTSTVSVLTEAIGYTHVLHEQIQTLSIPYMKFAQSKSSRIVQLDSKKVDSREFKPDLRSRGLCLVPLSFASSINRWA 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2129g00018 271 MobiDBLite consensus disorder prediction 152 166 - -
Gabi2129g00018 271 MobiDBLite consensus disorder prediction 147 174 - -
Gabi2129g00018 271 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 74 265 - -
Gabi2129g00018 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Gabi2129g00018 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 225 IPR036638 GO:0046983
Gabi2129g00018 271 CDD bHLH_AtbHLH_like 173 220 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2129g00018 Gabi-Chr2129 90303 94887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2129g00018 164 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 60.396 3.71e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2129g00018 - - gmx:100785177 228.024