Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2129g00006 ATGGATCACTCTCAAATTGTAACTATTGAAGATATTGACATGAGTGAAAGTTTAGTATGTGTAGATGATATTGTTGATTTGGAAAAAGACGCGGATGAATTTGGAGAAGATGATCTTAGTGAAATCATGGCAAACAAAGATGGTGAATGTGGGGAAGACAATGCACATGCAATTACGGGAGATGTTGATACCGAATTAAGCAAGGCCCCTATTTTAACTAGAGTTTTTGAGACATCAGAAGAAGCTTATGCATTTTATAATGCTTACGCAAAAGGCAAGGGGTTTGAAATACGCAAGCAATACCATAATAAGAGGTTAATTACAAAACAAATATATAGGTGGAATTATGTGTGCTCGAAGCAAGGTGTCAAGAGACAACATGATAAAAGAGCTGATGTTGACAATGTCAAAAGGCAAAGGGATACAAGGATTAATTGTATGGCAATGTTACAAGTAAAGTTGGTGGATGGCCTATGGAAAGTGGAGAAGTTCAATGATATACACAATCATCCATTGATTAACACTCCAACAAAGGTGAAGAAGTTTCTTTCTCAGAATGAATTGAGACGCTCAGACTTGACAAAATCTGTTGTTTCTAAGCTTTATCAAGAGGGTTTAACATCTTCGAAAATCTCAAAGGTTGTGAGCGCTATGAACAAAGAGGTTAATCTTACTTCCGTTCAAATCAATAGTATTATATATAGCCAGCGAAAGAATAATGTGGGGCGAGAATGTCAGGGCATCATCAAACACTTTCAAAAGAAGTCCATGGTTGATGGAGCTTTTTATTTTGATATGGATTTGGAAGAAGATGGAACTTTAAGAAGCGTATTATGGGCAAATGGTAGGTCAAGAGCTGCATATGCTCATTTGAAGTCCTTGTCTTTGATGTGA 894 0.3658 MDHSQIVTIEDIDMSESLVCVDDIVDLEKDADEFGEDDLSEIMANKDGECGEDNAHAITGDVDTELSKAPILTRVFETSEEAYAFYNAYAKGKGFEIRKQYHNKRLITKQIYRWNYVCSKQGVKRQHDKRADVDNVKRQRDTRINCMAMLQVKLVDGLWKVEKFNDIHNHPLINTPTKVKKFLSQNELRRSDLTKSVVSKLYQEGLTSSKISKVVSAMNKEVNLTSVQINSIIYSQRKNNVGRECQGIIKHFQKKSMVDGAFYFDMDLEEDGTLRSVLWANGRSRAAYAHLKSLSLM 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2129g00006 297 Pfam FAR1 DNA-binding domain 85 173 IPR004330 -
Gabi2129g00006 297 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2129g00006 Gabi-Chr2129 22279 23172 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2129g00006 FAR1 2.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2129g00006 - - ecad:122594423 197.978